RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CHD9Q3L8U1 2897 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 HIDE1A8MVS5 230 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 SYN3O14994 580 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 PMM2O15305 246 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 ASS1P00966 412 aaKnown RBP13.99□□□□□ -0.17
VPS33A-202ENST00000451053 URODP06132 367 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 ODC1P11926 461 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 PAX3P23760 479 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 CA8P35219 290 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 PTPROQ16827 1216 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 WDR72Q3MJ13 1102 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 VWA3BQ502W6 1294 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 KIAA0319Q5VV43 1072 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 WSCD1Q658N2 575 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 KIAA1841Q6NSI8 718 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 MICAL1Q8TDZ2 1067 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 MYLIPQ8WY64 445 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 MRFAP1L1Q96HT8 127 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
VPS33A-202ENST00000451053 NDST4Q9H3R1 872 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 VRTNQ9H8Y1 702 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 APOBEC3GQ9HC16 384 aaKnown RBP13.99□□□□□ -0.17
VPS33A-202ENST00000451053 RAB20Q9NX57 234 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 MTMR10Q9NXD2 777 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 IFNKQ9P0W0 207 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 NXF1Q9UBU9 619 aaKnown RBP13.99□□□□□ -0.17
VPS33A-202ENST00000451053 STK39Q9UEW8 545 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 L1RE1Q9UN81 338 aa13.99□□□□□ -0.17
VPS33A-202ENST00000451053 LAMA2P24043 3122 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 C2orf71A6NGG8 1288 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 PES1O00541 588 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 P4HA2O15460 535 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 HUS1O60921 280 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 LILRB3O75022 631 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 ADCY5O95622 1261 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 CXCL14O95715 111 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 TYMPP19971 482 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 ZNF75DP51815 510 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 COPB1P53618 953 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 NOP14P78316 857 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 SMC1AQ14683 1233 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 SOWAHAQ2M3V2 549 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 ZNF667Q5HYK9 610 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 SCARA5Q6ZMJ2 495 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 APTXQ7Z2E3 356 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 LIMS2Q7Z4I7 341 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 ADGRD2Q7Z7M1 963 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 PDCL2Q8N4E4 241 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 APPL2Q8NEU8 664 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 LMO3Q8TAP4 145 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 LNX1Q8TBB1 728 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 PIK3R5Q8WYR1 880 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 TAF4BQ92750 862 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 GAS2L1Q99501 681 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 IMPG2Q9BZV3 1241 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 VPS16Q9H269 839 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 SMYD3Q9H7B4 428 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 NGRNQ9NPE2 291 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 MRPL17Q9NRX2 175 aaKnown RBP13.98□□□□□ -0.17
VPS33A-202ENST00000451053 MTCH2Q9Y6C9 303 aa13.98□□□□□ -0.17
VPS33A-202ENST00000451053 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 LGALS16A8MUM7 142 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 CYP11A1P05108 521 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 RPL17P18621 184 aaKnown RBP13.97□□□□□ -0.17
VPS33A-202ENST00000451053 IGFBP4P22692 258 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 CDC25BP30305 580 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 ASPAP45381 313 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 TNNC1P63316 161 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 LRMPQ12912 555 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 MRPL58Q14197 206 aaKnown RBP13.97□□□□□ -0.17
VPS33A-202ENST00000451053 PSMD5Q16401 504 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 PDE12Q6L8Q7 609 aaKnown RBP13.97□□□□□ -0.17
VPS33A-202ENST00000451053 OSTM1Q86WC4 334 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 ADGRF2Q8IZF7 708 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 TOP6BLQ8N6T0 577 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 MRPL43Q8N983 215 aaKnown RBP13.97□□□□□ -0.17
VPS33A-202ENST00000451053 CCDC150Q8NCX0 1101 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 KBTBD7Q8WVZ9 684 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 TATDN2Q93075 761 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 MMS19Q96T76 1030 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 CRACR2AQ9BSW2 395 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 XPO4Q9C0E2 1151 aaKnown RBP13.97□□□□□ -0.17
VPS33A-202ENST00000451053 INTS2Q9H0H0 1204 aaKnown RBP13.97□□□□□ -0.17
VPS33A-202ENST00000451053 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 GCNT4Q9P109 453 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 IRAK3Q9Y616 596 aa13.97□□□□□ -0.17
VPS33A-202ENST00000451053 ARHGEF37A1IGU5 675 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 ADAM12O43184 909 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 HCRTO43612 131 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 OAZ2O95190 189 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 POU3F3P20264 500 aaPredicted RBP13.96□□□□□ -0.17
VPS33A-202ENST00000451053 RAP1GAPP47736 663 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 YWHAHQ04917 246 aaPredicted RBP13.96□□□□□ -0.17
VPS33A-202ENST00000451053 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
VPS33A-202ENST00000451053 CETN1Q12798 172 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms