RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 CNNM4Q6P4Q7 775 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 NELFCDQ8IXH7 590 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 GLIS3Q8NEA6 775 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 FLCNQ8NFG4 579 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 ST13P5Q8NFI4 369 aaPredicted RBP16.75■□□□□ 0.27
LIMS1-210ENST00000449684 ING5Q8WYH8 240 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 ANKRD36BP1Q96IX9 119 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 PRRX2Q99811 253 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 KIAA1586Q9HCI6 787 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 AGAP1Q9UPQ3 857 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 NUMBLQ9Y6R0 609 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 A0A1B0GVL5 298 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 KPNA7A9QM74 516 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 NARSO43776 548 aaKnown RBP16.74■□□□□ 0.27
LIMS1-210ENST00000449684 ITGB3P05106 788 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 SLFN14P0C7P3 912 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 SRFP11831 508 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 CMA1P23946 247 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 AVPR2P30518 371 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 POLR2BP30876 1174 aaKnown RBP16.74■□□□□ 0.27
LIMS1-210ENST00000449684 ALDH1A3P47895 512 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 DUSP4Q13115 394 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 GPR17Q13304 367 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 CUL4BQ13620 913 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 CSGALNACT2Q8N6G5 542 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 ZSWIM2Q8NEG5 633 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 ZNF507Q8TCN5 953 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 MCRS1Q96EZ8 462 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 SCAND2PQ9GZW5 306 aaPredicted RBP16.74■□□□□ 0.27
LIMS1-210ENST00000449684 PDE11AQ9HCR9 933 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 SLC39A2Q9NP94 309 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 EXOC1Q9NV70 894 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 HSPBP1Q9NZL4 362 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
LIMS1-210ENST00000449684 UBE4BO95155 1302 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 TNNC2P02585 160 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 PFKFB1P16118 471 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 EPHB3P54753 998 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 BFSP1Q12934 665 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 HTR4Q13639 388 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 PARM1Q6UWI2 310 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 GRAMD1CQ8IYS0 662 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 SIX5Q8N196 739 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 RDH13Q8NBN7 331 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 ASAH2Q9NR71 780 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 ITGA11Q9UKX5 1188 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 ZDHHC9Q9Y397 364 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 YIPF1Q9Y548 306 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 DOCK6Q96HP0 2047 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 ANK1P16157 1881 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 ZDBF2Q9HCK1 2354 aa16.73■□□□□ 0.27
LIMS1-210ENST00000449684 ANHXE9PGG2 379 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 CLIC2O15247 247 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 HUS1O60921 280 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 CYP11A1P05108 521 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 MYL4P12829 197 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 SYKP43405 635 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 CYP2J2P51589 502 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 VCPP55072 806 aaKnown RBP16.72■□□□□ 0.27
LIMS1-210ENST00000449684 SNRPFP62306 86 aaKnown RBP16.72■□□□□ 0.27
LIMS1-210ENST00000449684 RBP5P82980 135 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 MYO1EQ12965 1108 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 SLC39A12Q504Y0 691 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 WSCD1Q658N2 575 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
LIMS1-210ENST00000449684 NPAS3Q8IXF0 933 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 LEMD2Q8NC56 503 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 FAM200AQ8TCP9 573 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 FGF14Q92915 247 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 CCDC47Q96A33 483 aaKnown RBP16.72■□□□□ 0.27
LIMS1-210ENST00000449684 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 FNBP1Q96RU3 617 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 MTMR12Q9C0I1 747 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 AVENQ9NQS1 362 aaPredicted RBP16.72■□□□□ 0.27
LIMS1-210ENST00000449684 AGPAT3Q9NRZ7 376 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 GDE1Q9NZC3 331 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 WNT16Q9UBV4 365 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 CA14Q9ULX7 337 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 SLC27A5Q9Y2P5 690 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 DOCK8Q8NF50 2099 aa16.72■□□□□ 0.27
LIMS1-210ENST00000449684 MTMR11A4FU01 709 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 TNNI1P19237 187 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 WNT7BP56706 349 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 TAF12Q16514 161 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 DUOXA2Q1HG44 320 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 SLC5A9Q2M3M2 681 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 IER5LQ5T953 404 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 LMBRD2Q68DH5 695 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-210ENST00000449684 ASTLQ6HA08 431 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-210ENST00000449684 CBWD2Q8IUF1 395 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 DCP1BQ8IZD4 617 aaKnown RBP16.71■□□□□ 0.27
LIMS1-210ENST00000449684 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 C1orf127Q8N9H9 656 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 XXYLT1Q8NBI6 393 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 SCFD1Q8WVM8 642 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 CHAMP1Q96JM3 812 aa16.71■□□□□ 0.27
LIMS1-210ENST00000449684 TMEM209Q96SK2 561 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms