RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 VNN1O95497 513 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 C4BPAP04003 597 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 TMEM191BP0C7N4 346 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 LRPAP1P30533 357 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 POLR2BP30876 1174 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 MAGEA9P43362 315 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 ERVFC1P60507 584 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 GPM6BQ13491 265 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 CBWD6Q4V339 395 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 CBWD3Q5JTY5 395 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 CBWD5Q5RIA9 395 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 TRAPPC11Q7Z392 1133 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 WDR49Q8IV35 697 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 DHX40Q8IX18 779 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 SLC35C1Q96A29 364 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 CEP63Q96MT8 703 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 MKNK1Q9BUB5 465 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 DEF6Q9H4E7 631 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 ADAM28Q9UKQ2 775 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 DERAQ9Y315 318 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 PLXNA3P51805 1871 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 H3BNC9 293 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 MAPK13O15264 365 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 EFEMP2O95967 443 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 KRT19P08727 400 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 ETF1P62495 437 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 CCDC40Q4G0X9 1142 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 TCERG1LQ5VWI1 586 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 FOXR2Q6PJQ5 311 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 INTS8Q75QN2 995 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 BEST2Q8NFU1 509 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 POF1BQ8WVV4 589 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 CNOT6LQ96LI5 555 aaKnown RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 ARMCX3Q9UH62 379 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-203ENST00000449575 DACH1Q9UI36 760 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 DNAI1Q9UI46 699 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 AGAP1Q9UPQ3 857 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 DOCK6Q96HP0 2047 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 SLC16A3O15427 465 aaKnown RBP10.58□□□□□ -0.72
CCDC171-203ENST00000449575 CYP3A5P20815 502 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 DUOXA2Q1HG44 320 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 FUT10Q6P4F1 479 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 C15orf39Q6ZRI6 1047 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 TRIM59Q8IWR1 403 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 TMEM169Q96HH4 297 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 ARFGAP3Q9NP61 516 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 JRKLQ9Y4A0 524 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 TIMM13Q9Y5L4 95 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-203ENST00000449575 VCANP13611 3396 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 TRIM66O15016 1216 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 TADA2AO75478 443 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 KRT13P13646 458 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 CDR1P51861 262 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 LILRA4P59901 499 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 E4F1Q66K89 784 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-203ENST00000449575 DCLRE1AQ6PJP8 1040 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 RNF168Q8IYW5 571 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-203ENST00000449575 VPS52Q8N1B4 723 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 DEFB123Q8N688 67 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 TAS1R2Q8TE23 839 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 RSPH1Q8WYR4 309 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 ANKRD36BP1Q96IX9 119 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 GUCD1Q96NT3 240 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 PI4K2AQ9BTU6 479 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 PLVAPQ9BX97 442 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
CCDC171-203ENST00000449575 C2CD2LO14523 706 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 TADA3O75528 432 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 ATP1A3P13637 1013 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 TKTP29401 623 aaKnown RBP10.57□□□□□ -0.72
CCDC171-203ENST00000449575 MCCD1P59942 119 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-203ENST00000449575 MYL6P60660 151 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 PLCB3Q01970 1234 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 BIRC3Q13489 604 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 SURF1Q15526 300 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 ZACNQ401N2 412 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 RTP2Q5QGT7 225 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 SPOPLQ6IQ16 392 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 CC2D1AQ6P1N0 951 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-203ENST00000449575 FRMD5Q7Z6J6 570 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 PPM1EQ8WY54 764 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 SEMA4DQ92854 862 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 C11orf84Q9BUA3 381 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-203ENST00000449575 COLEC11Q9BWP8 271 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 HIDE1A8MVS5 230 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 TNNC2P02585 160 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 RB1P06400 928 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 RPL9P32969 192 aaKnown RBP10.57□□□□□ -0.72
CCDC171-203ENST00000449575 MARSP56192 900 aaKnown RBP10.57□□□□□ -0.72
CCDC171-203ENST00000449575 MYL5Q02045 173 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 FAM171A1Q5VUB5 890 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 CDKAL1Q5VV42 579 aa10.57□□□□□ -0.72
CCDC171-203ENST00000449575 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms