RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 EPHA5P54756 1037 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 SEC13P55735 322 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 RAB15P59190 212 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 KARSQ15046 597 aaKnown RBP8.1□□□□□ -1.11
RBM39-218ENST00000449489 ELF2Q15723 593 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 NAB2Q15742 525 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 CYP4A22Q5TCH4 519 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 SLC27A1Q6PCB7 646 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 APOA5Q6Q788 366 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 ANKS3Q6ZW76 656 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 PDZD4Q76G19 769 aaPredicted RBP8.1□□□□□ -1.11
RBM39-218ENST00000449489 MICU3Q86XE3 530 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 CEP57Q86XR8 500 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 RNF149Q8NC42 400 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 CCDC136Q96JN2 1154 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 SH2D3AQ9BRG2 576 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 DUSP15Q9H1R2 295 aaPredicted RBP8.1□□□□□ -1.11
RBM39-218ENST00000449489 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
RBM39-218ENST00000449489 TMEM9BQ9NQ34 198 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 RBM12Q9NTZ6 932 aaKnown RBP8.1□□□□□ -1.11
RBM39-218ENST00000449489 CDY1Q9Y6F8 540 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 COL12A1Q99715 3063 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 HEPACAM2A8MVW5 462 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 M0R2N6 131 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 CDX4O14627 284 aaPredicted RBP8.09□□□□□ -1.11
RBM39-218ENST00000449489 SGSM2O43147 1006 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TRAPPC3O43617 180 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 CHMP2AO43633 222 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 MOSPD3O75425 235 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 THP07101 528 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 ARF4P18085 180 aaPredicted RBP8.09□□□□□ -1.11
RBM39-218ENST00000449489 AKAP5P24588 427 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 CHMLP26374 656 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 ELF1P32519 619 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 RDXP35241 583 aaKnown RBP8.09□□□□□ -1.11
RBM39-218ENST00000449489 VIPR2P41587 438 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 GRM5P41594 1212 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 CCR2P41597 374 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 QARSP47897 775 aaKnown RBP8.09□□□□□ -1.11
RBM39-218ENST00000449489 KPNA1P52294 538 aaPredicted RBP8.09□□□□□ -1.11
RBM39-218ENST00000449489 CLDN10P78369 228 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 RTN1Q16799 776 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TSGA10IPQ3SY00 556 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TPGS2Q68CL5 300 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 C11orf74Q86VG3 221 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 ZSCAN18Q8TBC5 510 aaPredicted RBP8.09□□□□□ -1.11
RBM39-218ENST00000449489 TMEM143Q96AN5 459 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TCEAL4Q96EI5 215 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 CEP170P1Q96L14 293 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 MRGPRX2Q96LB1 330 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 ZSWIM3Q96MP5 696 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 CORO1BQ9BR76 489 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 SMOC1Q9H4F8 434 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 OBP2AQ9NY56 170 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 EBF1Q9UH73 591 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TRIP11Q15643 1979 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 THADAQ6YHU6 1953 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 PTPRQQ9UMZ3 2332 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 COL6A6A6NMZ7 2263 aa8.09□□□□□ -1.11
RBM39-218ENST00000449489 TEX15Q9BXT5 2789 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 CASTOR2A6NHX0 329 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 INO80B-WBP1J3KQ70 363 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 KHNYNO15037 678 aaKnown RBP8.08□□□□□ -1.12
RBM39-218ENST00000449489 ZBTB43O43298 467 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 EXTL3O43909 919 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
RBM39-218ENST00000449489 WEE1P30291 646 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 NPEPPSP55786 919 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 FGD1P98174 961 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 MBTD1Q05BQ5 628 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 DPYDQ12882 1025 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 TFDP1Q14186 410 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 PTPAQ15257 358 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 ARHGAP29Q52LW3 1261 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 PLA2G4FQ68DD2 849 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 IQCEQ6IPM2 695 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 TCEAL6Q6IPX3 200 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 MOXD1Q6UVY6 613 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 OTUD6AQ7L8S5 288 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 CYP2U1Q7Z449 544 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 C4orf19Q8IY42 314 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 YAF2Q8IY57 180 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 ELMOD1Q8N336 334 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 HASPINQ8TF76 798 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 RABGGTAQ92696 567 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 TCEAL3Q969E4 200 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 CPB2Q96IY4 423 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 PRIMPOLQ96LW4 560 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 ZNF512Q96ME7 567 aaPredicted RBP8.08□□□□□ -1.12
RBM39-218ENST00000449489 C22orf23Q9BZE7 217 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 RWDD1Q9H446 243 aaPredicted RBP8.08□□□□□ -1.12
RBM39-218ENST00000449489 SLC32A1Q9H598 525 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 PARP2Q9UGN5 583 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 EVLQ9UI08 416 aaPredicted RBP8.08□□□□□ -1.12
RBM39-218ENST00000449489 SLC8A2Q9UPR5 921 aa8.08□□□□□ -1.12
RBM39-218ENST00000449489 RBM8AQ9Y5S9 174 aaKnown RBP8.08□□□□□ -1.12
RBM39-218ENST00000449489 WASF2Q9Y6W5 498 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms