RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ARPP19P56211 112 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 TFAMQ00059 246 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 DPYDQ12882 1025 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 PSMD2Q13200 908 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 MYBPC2Q14324 1141 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 KNOP1Q1ED39 458 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 OVOS1Q6IE37 1185 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 KRBA2Q6ZNG9 492 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 LIMS2Q7Z4I7 341 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 NELFCDQ8IXH7 590 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 FSIP1Q8NA03 581 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 ITFG1Q8TB96 612 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 CACTINQ8WUQ7 758 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 CRISPLD1Q9H336 500 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 KIAA1586Q9HCI6 787 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 DMAC2Q9NW81 257 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 HCFC1R1Q9NWW0 138 aa15.2■□□□□ 0.02
RTFDC1-204ENST00000449062 KPNA7A9QM74 516 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 CYB561D2O14569 222 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 ZNF202O95125 648 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 OR4Q2P0C623 313 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 FSHRP23945 695 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 ADCY1Q08828 1119 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 WSCD1Q658N2 575 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 USP37Q86T82 979 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 LRRTM3Q86VH5 581 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 UBALD2Q8IYN6 164 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 ENGASEQ8NFI3 743 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 OR10T2Q8NGX3 314 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 RSAD2Q8WXG1 361 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 MFSD14AQ96MC6 490 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 TMEM209Q96SK2 561 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 KCTD10Q9H3F6 313 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 CYP4F11Q9HBI6 524 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 CEP72Q9P209 647 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 IGSF9Q9P2J2 1179 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 CGNQ9P2M7 1197 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 AGAP1Q9UPQ3 857 aa15.19■□□□□ 0.02
RTFDC1-204ENST00000449062 NRG2O14511 850 aaPredicted RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 RHOBTB3O94955 611 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 RPN1P04843 607 aaKnown RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 ITGB3P05106 788 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 ODC1P11926 461 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 POLR2BP30876 1174 aaKnown RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 GBP2P32456 591 aaPredicted RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 ELF1P32519 619 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 SNW1Q13573 536 aaKnown RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 SNRNP35Q16560 246 aaKnown RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 FMR1NBQ8N0W7 255 aaPredicted RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 SLC44A3Q8N4M1 653 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 CSGALNACT2Q8N6G5 542 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 LRRC52Q8N7C0 313 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 XXYLT1Q8NBI6 393 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 ZNF516Q92618 1163 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 FGF13Q92913 245 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 GDAP2Q9NXN4 497 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 ITGA11Q9UKX5 1188 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 CDH7Q9ULB5 785 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 INSL5Q9Y5Q6 135 aa15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 ZFP37Q9Y6Q3 630 aaPredicted RBP15.18■□□□□ 0.02
RTFDC1-204ENST00000449062 PRRG1O14668 218 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 RHOP08100 348 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 PTPN2P17706 415 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 PNPLA4P41247 253 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 EPHA5P54756 1037 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 RBP5P82980 135 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 CYP24A1Q07973 514 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 DUSP4Q13115 394 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 TDGQ13569 410 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 MTMR3Q13615 1198 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 HTR4Q13639 388 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 PSMD6Q15008 389 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 SURF1Q15526 300 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 DUOXA2Q1HG44 320 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 SLC5A9Q2M3M2 681 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 PABPC1LQ4VXU2 614 aaKnown RBP15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 PRSS36Q5K4E3 855 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 HS2ST1Q7LGA3 356 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 SLC9A9Q8IVB4 645 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 RDH13Q8NBN7 331 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 ATAD1Q8NBU5 361 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 PLEKHO2Q8TD55 490 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 NXPE3Q969Y0 559 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 RPP25Q9BUL9 199 aaKnown RBP15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 LRRC3Q9BY71 257 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 MTMR12Q9C0I1 747 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 ZCWPW1Q9H0M4 648 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 DSEQ9UL01 958 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 POLIQ9UNA4 740 aa15.17■□□□□ 0.02
RTFDC1-204ENST00000449062 MTMR11A4FU01 709 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 PDXKO00764 312 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 GABRDO14764 452 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 MOSPD3O75425 235 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 MICAL2O94851 1124 aa15.16■□□□□ 0.02
RTFDC1-204ENST00000449062 CST3P01034 146 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms