RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 SCTRP47872 440 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 RPL7AP62424 266 aaKnown RBP17.95■□□□□ 0.46
TOM1-210ENST00000449058 ZNF252P-AS1Q0IIN9 211 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 IZUMO3Q5VZ72 239 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 HIBCHQ6NVY1 386 aaPredicted RBP17.95■□□□□ 0.46
TOM1-210ENST00000449058 TAX1BP1Q86VP1 789 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 RCOR2Q8IZ40 523 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 ANKS4BQ8N8V4 417 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 FAM212AQ96EL1 285 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 IMPG2Q9BZV3 1241 aa17.95■□□□□ 0.46
TOM1-210ENST00000449058 TMEM120BA0PK00 339 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 MSCO60682 206 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 LSM8O95777 96 aaKnown RBP17.94■□□□□ 0.46
TOM1-210ENST00000449058 EDNRBP24530 442 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 TNFSF9P41273 254 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 BAG6P46379 1132 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 IFNAR2P48551 515 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 RBM41Q96IZ5 413 aaKnown RBP17.94■□□□□ 0.46
TOM1-210ENST00000449058 SLITRK1Q96PX8 696 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 FOXP3Q9BZS1 431 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 CTNNAL1Q9UBT7 734 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 LIASO43766 372 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 CALB1P05937 261 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 HARSP12081 509 aaKnown RBP17.94■□□□□ 0.46
TOM1-210ENST00000449058 CREB1P16220 341 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 GJC1P36383 396 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 CETN2P41208 172 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 SSR1P43307 286 aaKnown RBP17.94■□□□□ 0.46
TOM1-210ENST00000449058 STAT5BP51692 787 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 EFNA5P52803 228 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 LMNB2Q03252 620 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 LRRC38Q5VT99 294 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 DRICH1Q6PGQ1 229 aaPredicted RBP17.94■□□□□ 0.46
TOM1-210ENST00000449058 PAXIP1Q6ZW49 1069 aaPredicted RBP17.94■□□□□ 0.46
TOM1-210ENST00000449058 NSRP1Q9H0G5 558 aaKnown RBP17.94■□□□□ 0.46
TOM1-210ENST00000449058 SLC40A1Q9NP59 571 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 SAMD15Q9P1V8 674 aa17.94■□□□□ 0.46
TOM1-210ENST00000449058 TOM1L1O75674 476 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 VIMP08670 466 aaKnown RBP17.93■□□□□ 0.46
TOM1-210ENST00000449058 TCF4P15884 667 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 ATP13A4Q4VNC1 1196 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 FAM160B1Q5W0V3 765 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 LBX2Q6XYB7 198 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 ZCCHC9Q8N567 271 aaKnown RBP17.93■□□□□ 0.46
TOM1-210ENST00000449058 PRPF31Q8WWY3 499 aaKnown RBP17.93■□□□□ 0.46
TOM1-210ENST00000449058 ELAC2Q9BQ52 826 aaKnown RBP17.93■□□□□ 0.46
TOM1-210ENST00000449058 MCL1Q07820 350 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.93■□□□□ 0.462e-7■■□□□ 13.9
TOM1-210ENST00000449058 TRPM4Q8TD43 1214 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 MRPL4Q9BYD3 311 aaKnown RBP17.93■□□□□ 0.46
TOM1-210ENST00000449058 KLHL11Q9NVR0 708 aa17.93■□□□□ 0.46
TOM1-210ENST00000449058 SOWAHBA6NEL2 793 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 PI4K2BG5E9Z4 385 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 OAS1P00973 400 aaKnown RBP17.92■□□□□ 0.46
TOM1-210ENST00000449058 MYL6P60660 151 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 NEDD9Q14511 834 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 PPP1R15BQ5SWA1 713 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 CDCA2Q69YH5 1023 aaPredicted RBP17.92■□□□□ 0.46
TOM1-210ENST00000449058 MFSD7Q6UXD7 560 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 MTMR12Q9C0I1 747 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 NIF3L1Q9GZT8 377 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 EURLQ9NYK6 297 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 PPME1Q9Y570 386 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 PPP2R3BQ9Y5P8 575 aa17.92■□□□□ 0.46
TOM1-210ENST00000449058 VGLL3A8MV65 326 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 ABLIM1O14639 778 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 DNAJC8O75937 253 aaPredicted RBP17.91■□□□□ 0.46
TOM1-210ENST00000449058 ABHD2P08910 425 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CETPP11597 493 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 KRT10P13645 584 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CDH5P33151 784 aaPredicted RBP17.91■□□□□ 0.46
TOM1-210ENST00000449058 PTPN7P35236 360 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 OGDHQ02218 1023 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 STAT4Q14765 748 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 P3H1Q32P28 736 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CEP128Q6ZU80 1094 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 GSTA5Q7RTV2 222 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 PRUNE1Q86TP1 453 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 RIOX2Q8IUF8 465 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CYP4X1Q8N118 509 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CCHCR1Q8TD31 782 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 ACO2Q99798 780 aaKnown RBP17.91■□□□□ 0.46
TOM1-210ENST00000449058 ZNF518BQ9C0D4 1074 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CISHQ9NSE2 258 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 KLC4Q9NSK0 619 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 BTBD7Q9P203 1132 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 DNPEPQ9ULA0 475 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 IVNS1ABPQ9Y6Y0 642 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 OGTO15294 1046 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 SNX3O60493 162 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 PEX10O60683 326 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 CDH16O75309 829 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 TJP3O95049 919 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 KRT1P04264 644 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 BRD2P25440 801 aaKnown RBP17.91■□□□□ 0.46
TOM1-210ENST00000449058 NF2P35240 595 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 TCF7P36402 384 aaPredicted RBP17.91■□□□□ 0.46
TOM1-210ENST00000449058 COPS2P61201 443 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 XRCC4Q13426 336 aa17.91■□□□□ 0.46
TOM1-210ENST00000449058 MPP2Q14168 576 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms