RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TBC1D3GQ6DHY5 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3CQ6IPX1 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3Q8IZP1 549 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 DIS3LQ8TF46 1054 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 POLR3CQ9BUI4 534 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PPANQ9NQ55 473 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHF24Q9UPV7 400 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PCDHA11Q9Y5I1 949 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ACKR2O00590 384 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 MLH1P40692 756 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF792Q3KQV3 632 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 GPAT2Q6NUI2 795 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 LUZP1Q86V48 1076 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ANKS1AQ92625 1134 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 RAD54LQ92698 747 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CFAP57Q96MR6 1250 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 USP28Q96RU2 1077 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 MYH10P35580 1976 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 GRXCR1A8MXD5 290 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 CES2O00748 559 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM200BP0CF97 657 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 OR1D2P34982 312 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 CLCN6P51797 869 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 UBASH3AP57075 661 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 DRP2Q13474 957 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 POLD3Q15054 466 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 HAUS1Q96CS2 278 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 GPR88Q9GZN0 384 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 UBE2ZQ9H832 354 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 PCDHA2Q9Y5H9 948 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 EOMESO95936 686 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 PRKAA1Q13131 559 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 PLEKHG6Q3KR16 790 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 KCNT2Q6UVM3 1135 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 ADCK2Q7Z695 626 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHACTR4Q8IZ21 702 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 DPP3Q9NY33 737 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 ALS2Q96Q42 1657 aa5.96□□□□□ -1.45
CDC42BPA-209ENST00000448940 CSH1P0DML2 217 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CSH2P0DML3 217 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 TUSC3Q13454 348 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMEM35BQ8NCS4 154 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 HPDLQ96IR7 371 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 LMAN2LQ9H0V9 348 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 SOHLH2Q9NX45 425 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 RUVBL2Q9Y230 463 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 C4AP0C0L4 1744 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 ATG2BQ96BY7 2078 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCDC195A0A1B0GUA6 201 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 EIF3CLB5ME19 914 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 PURAQ00577 322 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 C6orf118Q5T5N4 469 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 BTN2A1Q7KYR7 527 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CARNMT1Q8N4J0 409 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CDK5RAP1Q96SZ6 601 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 OPHN1O60890 802 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 FSBPO95073 299 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 DARSP14868 501 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 PTPN2P17706 415 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 SP2Q02086 613 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 KLHL30Q0D2K2 578 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CHMP1BQ7LBR1 199 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC51AQ86UW1 340 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CHSY1Q86X52 802 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 HAPLN3Q96S86 360 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CRACR2AQ9BSW2 395 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 VPS16Q9H269 839 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 SERPIND1P05546 499 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 COL6A1P12109 1028 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 HOXB8P17481 243 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 FBXO47Q5MNV8 452 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 ANO7Q6IWH7 933 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 DCLRE1AQ6PJP8 1040 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 TBC1D19Q8N5T2 526 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 NAT16Q8N8M0 369 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 KREMEN2Q8NCW0 462 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 OXER1Q8TDS5 423 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 RHBDD1Q8TEB9 315 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CLIC6Q96NY7 704 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 SP110Q9HB58 689 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 PCMTD2Q9NV79 361 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 UBIAD1Q9Y5Z9 338 aa5.96□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM170BA6NMN3 283 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 M0QYV0 167 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 PODXLO00592 558 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 RECQL4O94761 1208 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 PTGS1P23219 599 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SGSM1Q2NKQ1 1148 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 EOGTQ5NDL2 527 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 KRT39Q6A163 491 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 RINT1Q6NUQ1 792 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 UNC13DQ70J99 1090 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCDC60Q8IWA6 550 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 SPC24Q8NBT2 197 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 IFT43Q96FT9 208 aa5.95□□□□□ -1.46
CDC42BPA-209ENST00000448940 STRCP1A6NGW2 1772 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms