RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 KXD1Q9BQD3 176 aa21.3■■□□□ 1
VCP-203ENST00000448530 TBC1D17Q9HA65 648 aa21.3■■□□□ 1
VCP-203ENST00000448530 SPTLC1O15269 473 aa21.29■■□□□ 1
VCP-203ENST00000448530 CEBPBP17676 345 aa21.29■■□□□ 1
VCP-203ENST00000448530 ME1P48163 572 aa21.29■■□□□ 1
VCP-203ENST00000448530 GPC5P78333 572 aa21.29■■□□□ 1
VCP-203ENST00000448530 ASIC1P78348 528 aa21.29■■□□□ 1
VCP-203ENST00000448530 TFAMQ00059 246 aaKnown RBP21.29■■□□□ 1
VCP-203ENST00000448530 ATL3Q6DD88 541 aa21.29■■□□□ 1
VCP-203ENST00000448530 CACTINQ8WUQ7 758 aaKnown RBP21.29■■□□□ 1
VCP-203ENST00000448530 SHDQ96IW2 340 aa21.29■■□□□ 1
VCP-203ENST00000448530 ZNF560Q96MR9 790 aa21.29■■□□□ 1
VCP-203ENST00000448530 PYM1Q9BRP8 204 aaKnown RBP21.29■■□□□ 1
VCP-203ENST00000448530 ASAH2Q9NR71 780 aa21.29■■□□□ 1
VCP-203ENST00000448530 FAM86C1Q9NVL1 165 aa21.29■■□□□ 1
VCP-203ENST00000448530 KBTBD4Q9NVX7 518 aa21.29■■□□□ 1
VCP-203ENST00000448530 FAM13BQ9NYF5 915 aa21.29■■□□□ 1
VCP-203ENST00000448530 RBAKQ9NYW8 714 aaPredicted RBP21.29■■□□□ 1
VCP-203ENST00000448530 CFAP45Q9UL16 551 aa21.29■■□□□ 1
VCP-203ENST00000448530 YIPF1Q9Y548 306 aa21.29■■□□□ 1
VCP-203ENST00000448530 SCN1AP35498 2009 aa21.29■■□□□ 1
VCP-203ENST00000448530 CACNA1HO95180 2353 aa21.28■■□□□ 1
VCP-203ENST00000448530 CYB561D2O14569 222 aa21.28■■□□□ 1
VCP-203ENST00000448530 PI15O43692 258 aa21.28■■□□□ 1
VCP-203ENST00000448530 MICAL2O94851 1124 aa21.28■■□□□ 1
VCP-203ENST00000448530 PRPF6O94906 941 aaKnown RBP21.28■■□□□ 1
VCP-203ENST00000448530 MYL4P12829 197 aa21.28■■□□□ 1
VCP-203ENST00000448530 ALDH1A3P47895 512 aa21.28■■□□□ 1
VCP-203ENST00000448530 EPHB3P54753 998 aa21.28■■□□□ 1
VCP-203ENST00000448530 PFKPQ01813 784 aa21.28■■□□□ 1
VCP-203ENST00000448530 DUSP4Q13115 394 aa21.28■■□□□ 1
VCP-203ENST00000448530 E2F4Q16254 413 aa21.28■■□□□ 1
VCP-203ENST00000448530 SV2CQ496J9 727 aa21.28■■□□□ 1
VCP-203ENST00000448530 SHC4Q6S5L8 630 aa21.28■■□□□ 1
VCP-203ENST00000448530 BRSK2Q8IWQ3 736 aa21.28■■□□□ 1
VCP-203ENST00000448530 EFCAB13Q8IY85 973 aa21.28■■□□□ 1
VCP-203ENST00000448530 THEM5Q8N1Q8 247 aa21.28■■□□□ 1
VCP-203ENST00000448530 FGFBP2Q9BYJ0 223 aa21.28■■□□□ 1
VCP-203ENST00000448530 TRIM9Q9C026 710 aa21.28■■□□□ 1
VCP-203ENST00000448530 CEP72Q9P209 647 aa21.28■■□□□ 1
VCP-203ENST00000448530 GTF3C3Q9Y5Q9 886 aa21.28■■□□□ 1
VCP-203ENST00000448530 GOLGA8IPA6NC78 632 aa21.27■■□□□ 1
VCP-203ENST00000448530 GOLGA8JA6NMD2 632 aa21.27■■□□□ 1
VCP-203ENST00000448530 KIAA0391O15091 583 aaKnown RBP21.27■■□□□ 1
VCP-203ENST00000448530 EXTL3O43909 919 aa21.27■■□□□ 1
VCP-203ENST00000448530 ECI2O75521 394 aa21.27■■□□□ 1
VCP-203ENST00000448530 CYP11A1P05108 521 aa21.27■■□□□ 1
VCP-203ENST00000448530 PNPLA4P41247 253 aa21.27■■□□□ 1
VCP-203ENST00000448530 PRSS36Q5K4E3 855 aa21.27■■□□□ 1
VCP-203ENST00000448530 PHLDB3Q6NSJ2 640 aa21.27■■□□□ 1
VCP-203ENST00000448530 TCEAL4Q96EI5 215 aa21.27■■□□□ 1
VCP-203ENST00000448530 CBWD1Q9BRT8 395 aa21.27■■□□□ 1
VCP-203ENST00000448530 PCIF1Q9H4Z3 704 aa21.27■■□□□ 1
VCP-203ENST00000448530 MAGEF1Q9HAY2 307 aa21.27■■□□□ 1
VCP-203ENST00000448530 TSC2P49815 1807 aa21.27■□□□□ 0.99
VCP-203ENST00000448530 KPNA7A9QM74 516 aa21.26■□□□□ 0.99
VCP-203ENST00000448530 POLR2DO15514 142 aaKnown RBP21.26■□□□□ 0.99
VCP-203ENST00000448530 CENPPQ6IPU0 288 aa21.26■□□□□ 0.99
VCP-203ENST00000448530 CCDC105Q8IYK2 499 aa21.26■□□□□ 0.99
VCP-203ENST00000448530 HS6ST3Q8IZP7 471 aa21.26■□□□□ 0.99
VCP-203ENST00000448530 DTWD2Q8NBA8 298 aa21.26■□□□□ 0.99
VCP-203ENST00000448530 PHOX2BQ99453 314 aa21.26■□□□□ 0.99
VCP-203ENST00000448530 SLC27A5Q9Y2P5 690 aa21.26■□□□□ 0.99
VCP-203ENST00000448530 R3HCC1Q9Y3T6 440 aaKnown RBP21.26■□□□□ 0.99
VCP-203ENST00000448530 MTMR11A4FU01 709 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 SLC39A12Q504Y0 691 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 GPD1LQ8N335 351 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 ATAD1Q8NBU5 361 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 HPS3Q969F9 1004 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 ELSPBP1Q96BH3 223 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 SLITRK6Q9H5Y7 841 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 ZFP14Q9HCL3 533 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 AGAP1Q9UPQ3 857 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 SIT1Q9Y3P8 196 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 ASB3Q9Y575 518 aa21.25■□□□□ 0.99
VCP-203ENST00000448530 EIF3DO15371 548 aaKnown RBP eCLIP21.24■□□□□ 0.992e-15■■□□□ 11.6
VCP-203ENST00000448530 VNN2O95498 520 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 ITGB3P05106 788 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 POLR2BP30876 1174 aaKnown RBP21.24■□□□□ 0.99
VCP-203ENST00000448530 CCR2P41597 374 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 EPHA5P54756 1037 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 PRKCQQ04759 706 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 SNW1Q13573 536 aaKnown RBP21.24■□□□□ 0.99
VCP-203ENST00000448530 MLF2Q15773 248 aaPredicted RBP21.24■□□□□ 0.99
VCP-203ENST00000448530 FAM26FQ5R3K3 315 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 WSCD1Q658N2 575 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 TANGO2Q6ICL3 276 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 CNNM4Q6P4Q7 775 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 ZSWIM2Q8NEG5 633 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 OR10T2Q8NGX3 314 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 TMEM209Q96SK2 561 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 C7orf25Q9BPX7 421 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 GPR88Q9GZN0 384 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 HSFX1Q9UBD0 423 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 ITGA11Q9UKX5 1188 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 PCDHA7Q9UN72 937 aa21.24■□□□□ 0.99
VCP-203ENST00000448530 ZNF233A6NK53 670 aa21.23■□□□□ 0.99
VCP-203ENST00000448530 KRT19P08727 400 aa21.23■□□□□ 0.99
VCP-203ENST00000448530 TMEM191BP0C7N4 346 aa21.23■□□□□ 0.99
VCP-203ENST00000448530 TUFMP49411 452 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms