RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 FDXACB1Q9BRP7 624 aaPredicted RBP15.72■□□□□ 0.11
SF1-211ENST00000448404 MTUS1Q9ULD2 1270 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 DIS3Q9Y2L1 958 aaKnown RBP15.72■□□□□ 0.11
SF1-211ENST00000448404 HMGB1P1B2RPK0 211 aaPredicted RBP15.72■□□□□ 0.11
SF1-211ENST00000448404 PROSCO94903 275 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 IFNAR2P48551 515 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 TRPC3Q13507 836 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 KYNUQ16719 465 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 DENND2CQ68D51 928 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 MGARPQ8TDB4 240 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 SDCBP2Q9H190 292 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 PABPC3Q9H361 631 aaKnown RBP15.72■□□□□ 0.11
SF1-211ENST00000448404 SMYD3Q9H7B4 428 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 KIAA1586Q9HCI6 787 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 TBK1Q9UHD2 729 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 SLC12A6Q9UHW9 1150 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 RASAL2Q9UJF2 1139 aa15.72■□□□□ 0.11
SF1-211ENST00000448404 FAM187AA6NFU0 413 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 TMEM191BP0C7N4 346 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 INSRRP14616 1297 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 ADCYAP1R1P41586 468 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 ITGA8P53708 1063 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 LRRC14Q15048 493 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 ZNF699Q32M78 642 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 ATF7IP2Q5U623 682 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 MFSD7Q6UXD7 560 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 RAPGEF5Q92565 580 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 CCT8L2Q96SF2 557 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 MYCBPQ99417 103 aaPredicted RBP15.71■□□□□ 0.11
SF1-211ENST00000448404 NCAPGQ9BPX3 1015 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 FAM169AQ9Y6X4 670 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 FSCN2O14926 492 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 ATP2C2O75185 946 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 BANF1O75531 89 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 PIGRP01833 764 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 TAF5Q15542 800 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 JOSD2Q8TAC2 188 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 VTI1AQ96AJ9 217 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 LENG1Q96BZ8 264 aaPredicted RBP15.71■□□□□ 0.11
SF1-211ENST00000448404 C9orf72Q96LT7 481 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 IMPG2Q9BZV3 1241 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 CDC42EP4Q9H3Q1 356 aaKnown RBP15.71■□□□□ 0.11
SF1-211ENST00000448404 CPSF3Q9UKF6 684 aaKnown RBP15.71■□□□□ 0.11
SF1-211ENST00000448404 AGTPBP1Q9UPW5 1226 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 PPP2R3BQ9Y5P8 575 aa15.71■□□□□ 0.11
SF1-211ENST00000448404 LAMA2P24043 3122 aaKnown RBP15.71■□□□□ 0.11
SF1-211ENST00000448404 ADCY8P40145 1251 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 RFC5P40937 340 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 CORO7P57737 925 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 MCCD1P59942 119 aaPredicted RBP15.7■□□□□ 0.1
SF1-211ENST00000448404 TCEAL1Q15170 157 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 SPRED3Q2MJR0 410 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 CCDC62Q6P9F0 684 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 ENOSF1Q7L5Y1 443 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 ANKRD13AQ8IZ07 590 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 MYCBPAPQ8TBZ2 947 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 AFG1LQ8WV93 481 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 LPIN3Q9BQK8 851 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 DCLK3Q9C098 648 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 XYLT2Q9H1B5 865 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 CDT1Q9H211 546 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 ZWILCHQ9H900 591 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 OTOFQ9HC10 1997 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 H0YCG3 227 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 OGTO15294 1046 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 ZC3H11AO75152 810 aaKnown RBP eCLIP15.7■□□□□ 0.15e-9■■■□□ 15
SF1-211ENST00000448404 ASPAP45381 313 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 DCUN1D2Q6PH85 259 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 LRIG3Q6UXM1 1119 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 NLRP14Q86W24 1093 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 KIAA0319LQ8IZA0 1049 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 ZNF473Q8WTR7 871 aaKnown RBP15.7■□□□□ 0.1
SF1-211ENST00000448404 OSBPL8Q9BZF1 889 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 SIX4Q9UIU6 781 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 DNPEPQ9ULA0 475 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 AKT3Q9Y243 479 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 SPDYE5A6NIY4 337 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 EBAG9O00559 213 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 RIPK2O43353 540 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 GRAP2O75791 330 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 ITGB3P05106 788 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 IVDP26440 423 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 PPP2R2AP63151 447 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 GAD2Q05329 585 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 DUOXA2Q1HG44 320 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 MAP1SQ66K74 1059 aaPredicted RBP15.7■□□□□ 0.1
SF1-211ENST00000448404 ARMCX2Q7L311 632 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 TMEM134Q9H6X4 195 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 PCSK1NQ9UHG2 260 aa15.7■□□□□ 0.1
SF1-211ENST00000448404 PASKQ96RG2 1323 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 LACTBL1A8MY62 500 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 GOLGA8MH3BSY2 632 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 HCRTO43612 131 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 LDHAP00338 332 aaKnown RBP15.69■□□□□ 0.1
SF1-211ENST00000448404 CD48P09326 243 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 MMP8P22894 467 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 RFC1P35251 1148 aaPredicted RBP15.69■□□□□ 0.1
SF1-211ENST00000448404 CYP1B1Q16678 543 aa15.69■□□□□ 0.1
SF1-211ENST00000448404 PTPN20Q4JDL3 420 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms