RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 SPTLC1O15269 473 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 TEX28O15482 410 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 CLASP2O75122 1294 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 C4BPAP04003 597 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 TRIM49P0CI25 452 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 TRIM49CP0CI26 452 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 ZACNQ401N2 412 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 CTXN3Q4LDR2 81 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 TDRD10Q5VZ19 366 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 KRT39Q6A163 491 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 SV2AQ7L0J3 742 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 FAM114A1Q8IWE2 563 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 THEM5Q8N1Q8 247 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 CXorf38Q8TB03 319 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 CASP10Q92851 521 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 BORCS6Q96GS4 357 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 TMEM8AQ9HCN3 771 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 GDAP2Q9NXN4 497 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 SNX9Q9Y5X1 595 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 HCFC2Q9Y5Z7 792 aa14.07□□□□□ -0.16
ERGIC3-209ENST00000447986 GLUD1P00367 558 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 C1RP00736 705 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 PIK3CAP42336 1068 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 GCLMP48507 274 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 TNNC1P63316 161 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 ADAM15Q13444 863 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 NCOA4Q13772 614 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 SGSM1Q2NKQ1 1148 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 OVOS1Q6IE37 1185 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 DPH6Q7L8W6 267 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 GLYCTKQ8IVS8 523 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 TMEM86AQ8N2M4 240 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 TAF4BQ92750 862 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 NAT10Q9H0A0 1025 aaKnown RBP14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 TIMM13Q9Y5L4 95 aaPredicted RBP14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 CDY1Q9Y6F8 540 aa14.06□□□□□ -0.16
ERGIC3-209ENST00000447986 PRRC2BQ5JSZ5 2229 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 OAZ2O95190 189 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 STAU1O95793 577 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 CYP11A1P05108 521 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 P4HA1P13674 534 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 RPL17P18621 184 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 OR1D2P34982 312 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 GTF2F1P35269 517 aaKnown RBP eCLIP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 MXI1P50539 228 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 CLCN4P51793 760 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 MARSP56192 900 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 MCCD1P59942 119 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 MYL6P60660 151 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 CETN1Q12798 172 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 MRPL58Q14197 206 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 AAK1Q2M2I8 961 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 ZNF699Q32M78 642 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 WDR72Q3MJ13 1102 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 LLGL2Q6P1M3 1020 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 CREBRFQ8IUR6 639 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 TOP6BLQ8N6T0 577 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 SPATA18Q8TC71 538 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 MMS19Q96T76 1030 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 CLSTN3Q9BQT9 956 aa14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 UBE2ZQ9H832 354 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 MAGEC2Q9UBF1 373 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-209ENST00000447986 OR6C75A6NL08 312 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 N4BP1O75113 896 aaKnown RBP14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 TYRO3Q06418 890 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 PPP3CAQ08209 521 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 COL19A1Q14993 1142 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 CTC1Q2NKJ3 1217 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 ZNF667Q5HYK9 610 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 C1orf220Q5T0J3 134 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 SLC8B1Q6J4K2 584 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 TMEM184AQ6ZMB5 413 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 PALB2Q86YC2 1186 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 THAP9Q9H5L6 903 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 VRTNQ9H8Y1 702 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 DZANK1Q9NVP4 752 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 THEGQ9P2T0 379 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 FBXL5Q9UKA1 691 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 LINC01565O15544 149 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 CPB1P15086 417 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 LHX1P48742 406 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 RAB33AQ14088 237 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 WSCD1Q658N2 575 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 ADGRF2Q8IZF7 708 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 FBXL13Q8NEE6 735 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 HDAC7Q8WUI4 952 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 SLC35C1Q96A29 364 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 CNOT6LQ96LI5 555 aaKnown RBP14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 PLEKHA4Q9H4M7 779 aa14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 NXF1Q9UBU9 619 aaKnown RBP14.04□□□□□ -0.16
ERGIC3-209ENST00000447986 TGM5O43548 720 aa14.03□□□□□ -0.16
ERGIC3-209ENST00000447986 VNN1O95497 513 aa14.03□□□□□ -0.16
ERGIC3-209ENST00000447986 HLA-DRAP01903 254 aa14.03□□□□□ -0.16
ERGIC3-209ENST00000447986 FAM163BP0C2L3 166 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms