RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 SNX32Q86XE0 403 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 FAM90A1Q86YD7 464 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 SHISA5Q8N114 240 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 PQLC1Q8N2U9 271 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 MPP5Q8N3R9 675 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 CHCHD4Q8N4Q1 142 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 VGLL2Q8N8G2 317 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 OR5AN1Q8NGI8 311 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 LINC01599Q8WXQ3 324 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 GPR63Q9BZJ6 419 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 OR10A5Q9H207 317 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 CHST8Q9H2A9 424 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 GHITMQ9H3K2 345 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 TAF1DQ9H5J8 278 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 LDAHQ9H6V9 325 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ZCCHC17Q9NP64 241 aaKnown RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 LANCL2Q9NS86 450 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 MRGBPQ9NV56 204 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 HAUS2Q9NVX0 235 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 POLR3BQ9NW08 1133 aaPredicted RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 TMEM160Q9NX00 188 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 TBC1D29Q9UFV1 150 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 VPS28Q9UK41 221 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 ACSL6Q9UKU0 697 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 MTO1Q9Y2Z2 717 aaKnown RBP4.33□□□□□ -1.72
PMS1-216ENST00000447734 HS3ST4Q9Y661 456 aa4.33□□□□□ -1.72
PMS1-216ENST00000447734 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 A0A1W2PR48 441 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 DKC1O60832 514 aaKnown RBP eCLIP4.32□□□□□ -1.72
PMS1-216ENST00000447734 RASSF9O75901 435 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 INMTO95050 263 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 LY86O95711 162 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 TK1P04183 234 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 A1BGP04217 495 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 AMY1AP04745 511 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 CD1AP06126 327 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 TXNP10599 105 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 NPPBP16860 134 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 DDCP20711 480 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 IL1R2P27930 398 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 OAS2P29728 719 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 CTNNA1P35221 906 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 THBS2P35442 1172 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 UBA7P41226 1012 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 SEC24CP53992 1094 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 CD69Q07108 199 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 CTBP1Q13363 440 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 CUL4AQ13619 759 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 VWA3BQ502W6 1294 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 MAP3K21Q5TCX8 1036 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 LMBRD2Q68DH5 695 aaPredicted RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 ABHD15Q6UXT9 468 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 USP49Q70CQ1 688 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 CHD1LQ86WJ1 897 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 YAF2Q8IY57 180 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 ZGPATQ8N5A5 531 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 ANKS4BQ8N8V4 417 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 PCSK9Q8NBP7 692 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 CEP70Q8NHQ1 597 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 ZNF384Q8TF68 577 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 ZNF480Q8WV37 535 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 SNX33Q8WV41 574 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 PEX11GQ96HA9 241 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 DYDC2Q96IM9 177 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 MFSD14AQ96MC6 490 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 MPHOSPH8Q99549 860 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 DDX23Q9BUQ8 820 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 BTBD2Q9BX70 525 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 PABPC3Q9H361 631 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 RETREG1Q9H6L5 497 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 ELAC1Q9H777 363 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 BCO1Q9HAY6 547 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 RXFP1Q9HBX9 757 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 LRRC4CQ9HCJ2 640 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 HEYLQ9NQ87 328 aaPredicted RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 A1CFQ9NQ94 594 aaKnown RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 DTLQ9NZJ0 730 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 CFDP1Q9UEE9 299 aaPredicted RBP4.32□□□□□ -1.72
PMS1-216ENST00000447734 GIMAP2Q9UG22 337 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 SNX11Q9Y5W9 270 aa4.32□□□□□ -1.72
PMS1-216ENST00000447734 TMEM265A0A087WTH1 108 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 ZNF839A8K0R7 811 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 URI1O94763 535 aaPredicted RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 USP1O94782 785 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 TMEM63AO94886 807 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 FSBPO95073 299 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 MATN4O95460 622 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 GNAI3P08754 354 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 EGR1P18146 543 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 ACTN2P35609 894 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 SREBF1P36956 1147 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 PNLIPRP1P54315 467 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 CTXN1P60606 82 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 GNAI1P63096 354 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 KIR3DS1Q14943 382 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 UBE3CQ15386 1083 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 SMAD1Q15797 465 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms