RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 COL4A4P53420 1690 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 A0A1W2PPC1 479 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 M0QZQ0 153 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 NOL4O94818 638 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 ADCY5O95622 1261 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 WEE2P0C1S8 567 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 TKTP29401 623 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 PPM1AP35813 382 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 ERVK-21P61565 698 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 SOWAHAQ2M3V2 549 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 FAM171A1Q5VUB5 890 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 WSCD1Q658N2 575 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 IQCEQ6IPM2 695 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 TIFAQ96CG3 184 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 KREMEN1Q96MU8 473 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 PLCB1Q9NQ66 1216 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 APEX2Q9UBZ4 518 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 PCDHB8Q9UN66 801 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 RWDD3Q9Y3V2 267 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 FHOD1Q9Y613 1164 aa19.28■□□□□ 0.68
TRAPPC4-203ENST00000447216 TRAPPC3O43617 180 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 HUS1O60921 280 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 EFEMP2O95967 443 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 ODC1P11926 461 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 P4HA1P13674 534 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 CUL2Q13617 745 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 ARHGAP44Q17R89 818 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 CEP57Q86XR8 500 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 VSTM4Q8IW00 320 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 PDCL2Q8N4E4 241 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 MRPL45Q9BRJ2 306 aaKnown RBP19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 BCO2Q9BYV7 579 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 SLC28A3Q9HAS3 691 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 ALG13Q9NP73 1137 aaKnown RBP19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 NLRC4Q9NPP4 1024 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 DNAJC12Q9UKB3 198 aa19.27■□□□□ 0.68
TRAPPC4-203ENST00000447216 CARNS1A5YM72 827 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 CSPG5O95196 566 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 UCHL3P15374 230 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 CD58P19256 250 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 PAX3P23760 479 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 MRE11P49959 708 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 POLR2FP61218 127 aaKnown RBP19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 ELAVL2Q12926 359 aaKnown RBP19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 LRIT3Q3SXY7 679 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 TMC6Q7Z403 805 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 LIMS2Q7Z4I7 341 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 DDX53Q86TM3 631 aaKnown RBP19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 OSTM1Q86WC4 334 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 RNF168Q8IYW5 571 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 ADGRF2Q8IZF7 708 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 TOP6BLQ8N6T0 577 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 FBXO22Q8NEZ5 403 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 KBTBD7Q8WVZ9 684 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 ARNTL2Q8WYA1 636 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 MRFAP1L1Q96HT8 127 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 SAMD11Q96NU1 681 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 HERC2P3Q9BVR0 1158 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 PLVAPQ9BX97 442 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 MYH10P35580 1976 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 LAMA3Q16787 3333 aa19.26■□□□□ 0.67
TRAPPC4-203ENST00000447216 C5orf67F2Z3F1 127 aa19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 HCRTO43612 131 aa19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 FGFR3P22607 806 aa19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 TBXAS1P24557 533 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 PLCB3Q01970 1234 aa19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 KRT17Q04695 432 aa19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 RAPGEF1Q13905 1077 aa19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 NME7Q9Y5B8 376 aa19.25■□□□□ 0.67
TRAPPC4-203ENST00000447216 EPOPA6NHQ4 379 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 GRM6O15303 877 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 SOD2P04179 222 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 CYP11A1P05108 521 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 RB1P06400 928 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 PNMA6AP0CW24 399 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 TRIM21P19474 475 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 DNAJB1P25685 340 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 MFAP3P55082 362 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 GCNT1Q02742 428 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 GPM6BQ13491 265 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 USP41Q3LFD5 358 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 RTP2Q5QGT7 225 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 PRSS55Q6UWB4 352 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 GPIHBP1Q8IV16 184 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 VPS52Q8N1B4 723 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 UBR7Q8N806 425 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 SPPL3Q8TCT6 385 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 AUTS2Q8WXX7 1259 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 TTPALQ9BTX7 342 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 C11orf84Q9BUA3 381 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 NAA15Q9BXJ9 866 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 CYP3A43Q9HB55 503 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 CISHQ9NSE2 258 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 HMGXB4Q9UGU5 601 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 ITIH6Q6UXX5 1313 aa19.24■□□□□ 0.67
TRAPPC4-203ENST00000447216 RNF225M0QZC1 329 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 SOX1O00570 391 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 C2CD2LO14523 706 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms