RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 HIST1H2AHQ96KK5 128 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 HIST1H2AJQ99878 128 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 H2AFJQ9BTM1 129 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 TMEM245Q9H330 911 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 SYBUQ9NX95 663 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 PHTF1Q9UMS5 762 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 F5H423 210 aaPredicted RBP13.95□□□□□ -0.18
PRDM15-206ENST00000447016 H2AFYO75367 372 aaKnown RBP13.95□□□□□ -0.18
PRDM15-206ENST00000447016 RASSF9O75901 435 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 RBP3P10745 1247 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 NPEPPSP55786 919 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 KCNK10P57789 538 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 WDR72Q3MJ13 1102 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 XKR3Q5GH77 459 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 CCNJLQ8IV13 435 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 ARID3BQ8IVW6 561 aaPredicted RBP13.95□□□□□ -0.18
PRDM15-206ENST00000447016 FAR2Q96K12 515 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 CELF4Q9BZC1 486 aaKnown RBP13.95□□□□□ -0.18
PRDM15-206ENST00000447016 HERC5Q9UII4 1024 aaKnown RBP13.95□□□□□ -0.18
PRDM15-206ENST00000447016 CFAP74Q9C0B2 1584 aa13.95□□□□□ -0.18
PRDM15-206ENST00000447016 XPO1O14980 1071 aaKnown RBP13.94□□□□□ -0.18
PRDM15-206ENST00000447016 ERFP50548 548 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 RBP5P82980 135 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CHI3L2Q15782 390 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 SNRNP35Q16560 246 aaKnown RBP13.94□□□□□ -0.18
PRDM15-206ENST00000447016 MFN1Q8IWA4 741 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 TPCN2Q8NHX9 752 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 INPP5DQ92835 1189 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CNDP1Q96KN2 507 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 TMEM8AQ9HCN3 771 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 APPL1Q9UKG1 709 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 MAGI3Q5TCQ9 1506 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 C5orf58C9J3I9 102 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 FKBP6O75344 327 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 GSNP06396 782 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 THRAP10827 490 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 SLC9A1P19634 815 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CCDC15Q0P6D6 951 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 PLEKHM3Q6ZWE6 761 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 GPR141Q7Z602 305 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 JADE3Q92613 823 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 SPON2Q9BUD6 331 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 SIK2Q9H0K1 926 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 ACAD9Q9H845 621 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CAAP1Q9H8G2 361 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CFAP65Q6ZU64 1925 aaKnown RBP13.94□□□□□ -0.18
PRDM15-206ENST00000447016 RALAP11233 206 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 IFNEQ86WN2 208 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 SPATA18Q8TC71 538 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 TNPO2O14787 897 aaKnown RBP13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CAND2O75155 1236 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 BRD2P25440 801 aaKnown RBP13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CDC42EP1Q00587 391 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 NCOA4Q13772 614 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 MCEEQ96PE7 176 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 DDX50Q9BQ39 737 aaKnown RBP13.94□□□□□ -0.18
PRDM15-206ENST00000447016 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
PRDM15-206ENST00000447016 CALB2P22676 271 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ANKS3Q6ZW76 656 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.93□□□□□ -0.18
PRDM15-206ENST00000447016 WHRNQ9P202 907 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ZNF609O15014 1411 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 DFFAO00273 331 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 FOXO4P98177 505 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 CENPPQ6IPU0 288 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 CAVIN3Q969G5 261 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ELMO2Q96JJ3 720 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ILKAPQ9H0C8 392 aaPredicted RBP13.93□□□□□ -0.18
PRDM15-206ENST00000447016 GOLPH3Q9H4A6 298 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 KLHL11Q9NVR0 708 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 CAB39Q9Y376 341 aaPredicted RBP13.93□□□□□ -0.18
PRDM15-206ENST00000447016 CST8O60676 142 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 GLRA3O75311 464 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 PRKCBP05771 671 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 TARSP26639 723 aaKnown RBP13.93□□□□□ -0.18
PRDM15-206ENST00000447016 PLOD1Q02809 727 aaPredicted RBP13.93□□□□□ -0.18
PRDM15-206ENST00000447016 PTK6Q13882 451 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 LRRC6Q86X45 466 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 SHCBP1Q8NEM2 672 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 MDM1Q8TC05 714 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 RGL1Q9NZL6 768 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ADGRA3Q8IWK6 1321 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 LOC100653049A0A140TA62 436 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 KRT34O76011 436 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ACADSBP45954 432 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 SULT1E1P49888 294 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 ZNF543Q08ER8 600 aa13.93□□□□□ -0.18
PRDM15-206ENST00000447016 CSTF3Q12996 717 aaKnown RBP13.93□□□□□ -0.18
PRDM15-206ENST00000447016 RAB42Q8N4Z0 105 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms