RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FNBP1Q96RU3 617 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 PRKD2Q9BZL6 878 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 PIDD1Q9HB75 910 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 ZDHHC7Q9NXF8 308 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 NOTCH4Q99466 2003 aa15.99■□□□□ 0.15
HDAC4-204ENST00000446876 DOCK8Q8NF50 2099 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 BDP1A6H8Y1 2624 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 CALUO43852 315 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-204ENST00000446876 PRPF40AO75400 957 aaKnown RBP15.98■□□□□ 0.15
HDAC4-204ENST00000446876 KIF20AO95235 890 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 SMC2O95347 1197 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 VNN2O95498 520 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 PRCPP42785 496 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 NTHL1P78549 312 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 RBP5P82980 135 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 DUOXA2Q1HG44 320 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 CEP135Q66GS9 1140 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 RNF19BQ6ZMZ0 732 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 CCDC149Q6ZUS6 474 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 TRAPPC11Q7Z392 1133 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 RNF135Q8IUD6 432 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 SLC9A9Q8IVB4 645 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 LRRC52Q8N7C0 313 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 OR10T2Q8NGX3 314 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 ZNF461Q8TAF7 563 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 SPATA20Q8TB22 786 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 PGLYRP2Q96PD5 576 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 GSDMAQ96QA5 445 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 RTP3Q9BQQ7 232 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 CYP4F11Q9HBI6 524 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 RMND1Q9NWS8 449 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 MAN1B1Q9UKM7 699 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 POLIQ9UNA4 740 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 TRAF3IP3Q9Y228 551 aa15.98■□□□□ 0.15
HDAC4-204ENST00000446876 CLUHO75153 1309 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-204ENST00000446876 PRRG1O14668 218 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 PAPLNO95428 1278 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 CYP11A1P05108 521 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 PAX3P23760 479 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 NR2F2P24468 414 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 PNPLA4P41247 253 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 UBE2HP62256 183 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 DLG4P78352 724 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 ADCY1Q08828 1119 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 ZCWPW2Q504Y3 356 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 ZNF658Q5TYW1 1059 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-204ENST00000446876 EPHX3Q9H6B9 360 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 WDR6Q9NNW5 1121 aaKnown RBP15.97■□□□□ 0.15
HDAC4-204ENST00000446876 HCFC1R1Q9NWW0 138 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 MUTYHQ9UIF7 546 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 HOOK1Q9UJC3 728 aaKnown RBP15.97■□□□□ 0.15
HDAC4-204ENST00000446876 L1RE1Q9UN81 338 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 SNX9Q9Y5X1 595 aa15.97■□□□□ 0.15
HDAC4-204ENST00000446876 MYO10Q9HD67 2058 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 OR6C75A6NL08 312 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 HCRTO43612 131 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 N4BP1O75113 896 aaKnown RBP15.96■□□□□ 0.15
HDAC4-204ENST00000446876 CST3P01034 146 aaPredicted RBP15.96■□□□□ 0.15
HDAC4-204ENST00000446876 HNRNPA1P09651 372 aaKnown RBP eCLIP15.96■□□□□ 0.15
HDAC4-204ENST00000446876 ATF2P15336 505 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 ELF1P32519 619 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 TPGS2Q68CL5 300 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 GRASPQ7Z6J2 395 aaPredicted RBP15.96■□□□□ 0.15
HDAC4-204ENST00000446876 OSTM1Q86WC4 334 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 METTL23Q86XA0 190 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 PDCL2Q8N4E4 241 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 TTC9BQ8N6N2 239 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 TDRD5Q8NAT2 981 aaKnown RBP15.96■□□□□ 0.15
HDAC4-204ENST00000446876 PARD3BQ8TEW8 1205 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 ELMO3Q96BJ8 720 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 EEF2KMTQ96G04 330 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 HPDLQ96IR7 371 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 CRISPLD1Q9H336 500 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 AFF4Q9UHB7 1163 aaKnown RBP15.96■□□□□ 0.15
HDAC4-204ENST00000446876 DSEQ9UL01 958 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 NR2E1Q9Y466 385 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 INSL5Q9Y5Q6 135 aa15.96■□□□□ 0.15
HDAC4-204ENST00000446876 ARHGEF37A1IGU5 675 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 MTMR11A4FU01 709 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 BIN1O00499 593 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 AKAP3O75969 853 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 HOXA9P31269 272 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
HDAC4-204ENST00000446876 UVSSAQ2YD98 709 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 TDRD10Q5VZ19 366 aaKnown RBP15.95■□□□□ 0.14
HDAC4-204ENST00000446876 CYP26C1Q6V0L0 522 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 GET4Q7L5D6 327 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-204ENST00000446876 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-204ENST00000446876 TCEAL8Q8IYN2 117 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 TMEM174Q8WUU8 243 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 IPO9Q96P70 1041 aaKnown RBP15.95■□□□□ 0.14
HDAC4-204ENST00000446876 RHOBTB2Q9BYZ6 727 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 FRMD4BQ9Y2L6 1034 aa15.95■□□□□ 0.14
HDAC4-204ENST00000446876 R3HCC1Q9Y3T6 440 aaKnown RBP15.95■□□□□ 0.14
HDAC4-204ENST00000446876 TRIM49BA6NDI0 452 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 HUS1O60921 280 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 XYLBO75191 536 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 SOAT2O75908 522 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 LRG1P02750 347 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms