RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 KRT9P35527 623 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 SLC8A3P57103 927 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 ERVFC1P60507 584 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 LPIN3Q9BQK8 851 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 EMILIN2Q9BXX0 1053 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 TMEM8AQ9HCN3 771 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 HIDE1A8MVS5 230 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 TEX33O43247 280 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 RNASE9P60153 205 aaKnown RBP11.01□□□□□ -0.65
LIN54-203ENST00000446851 GOLGA8FQ08AF8 430 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 GOLGA8DPQ0D2H9 430 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 ELAVL2Q12926 359 aaKnown RBP11.01□□□□□ -0.65
LIN54-203ENST00000446851 BMT2Q1RMZ1 405 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 FRMD5Q7Z6J6 570 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 SPATA2LQ8IUW3 424 aaPredicted RBP11.01□□□□□ -0.65
LIN54-203ENST00000446851 SPATA20Q8TB22 786 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 PLEKHO2Q8TD55 490 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 GIPC2Q8TF65 315 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 SLC35C1Q96A29 364 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 XPO4Q9C0E2 1151 aaKnown RBP11.01□□□□□ -0.65
LIN54-203ENST00000446851 THAP9Q9H5L6 903 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 C2CD2Q9Y426 696 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 N4BP1O75113 896 aaKnown RBP11.01□□□□□ -0.65
LIN54-203ENST00000446851 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
LIN54-203ENST00000446851 KAT5Q92993 513 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 INTS2Q9H0H0 1204 aaKnown RBP11.01□□□□□ -0.65
LIN54-203ENST00000446851 HESX1Q9UBX0 185 aa11.01□□□□□ -0.65
LIN54-203ENST00000446851 SYNJ2BP-COX16A0A087WUM0 186 aa11□□□□□ -0.65
LIN54-203ENST00000446851 ATP2C2O75185 946 aa11□□□□□ -0.65
LIN54-203ENST00000446851 ADCY1Q08828 1119 aa11□□□□□ -0.65
LIN54-203ENST00000446851 CCDC142Q17RM4 750 aa11□□□□□ -0.65
LIN54-203ENST00000446851 RTP2Q5QGT7 225 aa11□□□□□ -0.65
LIN54-203ENST00000446851 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
LIN54-203ENST00000446851 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
LIN54-203ENST00000446851 GSTCDQ8NEC7 633 aa11□□□□□ -0.65
LIN54-203ENST00000446851 ZNF516Q92618 1163 aa11□□□□□ -0.65
LIN54-203ENST00000446851 COX16Q9P0S2 106 aa11□□□□□ -0.65
LIN54-203ENST00000446851 ITGA11Q9UKX5 1188 aa11□□□□□ -0.65
LIN54-203ENST00000446851 ARHGEF37A1IGU5 675 aa11□□□□□ -0.65
LIN54-203ENST00000446851 THAP12O43422 761 aa11□□□□□ -0.65
LIN54-203ENST00000446851 PIGRP01833 764 aa11□□□□□ -0.65
LIN54-203ENST00000446851 NAP1L1P55209 391 aaKnown RBP11□□□□□ -0.65
LIN54-203ENST00000446851 FAM189BP81408 668 aa11□□□□□ -0.65
LIN54-203ENST00000446851 DUSP4Q13115 394 aa11□□□□□ -0.65
LIN54-203ENST00000446851 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
LIN54-203ENST00000446851 MRPL10Q7Z7H8 261 aaKnown RBP11□□□□□ -0.65
LIN54-203ENST00000446851 COLGALT2Q8IYK4 626 aa11□□□□□ -0.65
LIN54-203ENST00000446851 ZNHIT6Q9NWK9 470 aaKnown RBP11□□□□□ -0.65
LIN54-203ENST00000446851 CBFA2T2O43439 604 aa11□□□□□ -0.65
LIN54-203ENST00000446851 GFPT2O94808 682 aa11□□□□□ -0.65
LIN54-203ENST00000446851 LRG1P02750 347 aa11□□□□□ -0.65
LIN54-203ENST00000446851 ADH1AP07327 375 aa11□□□□□ -0.65
LIN54-203ENST00000446851 PROZP22891 400 aa11□□□□□ -0.65
LIN54-203ENST00000446851 EEF1GP26641 437 aaKnown RBP11□□□□□ -0.65
LIN54-203ENST00000446851 PNPLA4P41247 253 aa11□□□□□ -0.65
LIN54-203ENST00000446851 SNRPFP62306 86 aaKnown RBP11□□□□□ -0.65
LIN54-203ENST00000446851 ZNF397Q8NF99 534 aaPredicted RBP11□□□□□ -0.65
LIN54-203ENST00000446851 ACP6Q9NPH0 428 aa11□□□□□ -0.65
LIN54-203ENST00000446851 DNAJC12Q9UKB3 198 aa11□□□□□ -0.65
LIN54-203ENST00000446851 SCAMP3O14828 347 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 SPTLC1O15269 473 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 RSPH1Q8WYR4 309 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 VWCEQ96DN2 955 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 CNTN3Q9P232 1028 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 RWDD3Q9Y3V2 267 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 SLC16A3O15427 465 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 GLUD1P00367 558 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 SSR1P43307 286 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 CT47A1Q5JQC4 288 aaPredicted RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 IQCEQ6IPM2 695 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 FAM149B1Q96BN6 582 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 PPP1R10Q96QC0 940 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 MKNK1Q9BUB5 465 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 TRPC7Q9HCX4 862 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 STK25O00506 426 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 BDNFP23560 247 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 LMO2P25791 158 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 ANXA13P27216 316 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 ALDH1A3P47895 512 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 RGS7P49802 495 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 NDST1P52848 882 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 UPP1Q16831 310 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 UBA3Q8TBC4 463 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 SEMA4DQ92854 862 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 NAP1L5Q96NT1 182 aaPredicted RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 MRPL45Q9BRJ2 306 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 NIF3L1Q9GZT8 377 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 TTC3P53804 2025 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 CLDN5O00501 218 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 MYL4P12829 197 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 PCSK1P29120 753 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 MFAP3P55082 362 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 RARS2Q5T160 578 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 DHX40Q8IX18 779 aaKnown RBP10.99□□□□□ -0.65
LIN54-203ENST00000446851 SLC7A14Q8TBB6 771 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 SYT15Q9BQS2 421 aa10.99□□□□□ -0.65
LIN54-203ENST00000446851 BARX2Q9UMQ3 279 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms