RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 FUT10Q6P4F1 479 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 ENOSF1Q7L5Y1 443 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 TAS1R1Q7RTX1 841 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 METTL23Q86XA0 190 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 CEP57Q86XR8 500 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 PDCL2Q8N4E4 241 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 TOP6BLQ8N6T0 577 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 KLHL23Q8NBE8 558 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 KREMEN1Q96MU8 473 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 TGS1Q96RS0 853 aaKnown RBP18.64■□□□□ 0.57
SGCE-206ENST00000445866 ARID3AQ99856 593 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 GANQ9H2C0 597 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 SMYD3Q9H7B4 428 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 L1RE1Q9UN81 338 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 FHOD1Q9Y613 1164 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 SF3B1O75533 1304 aaKnown RBP eCLIP18.64■□□□□ 0.57
SGCE-206ENST00000445866 LAMA2P24043 3122 aaKnown RBP18.64■□□□□ 0.57
SGCE-206ENST00000445866 ARHGEF37A1IGU5 675 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 CD58P19256 250 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 RAP1GAPP47736 663 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 ITIH6Q6UXX5 1313 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 NAA15Q9BXJ9 866 aaKnown RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 STK33Q9BYT3 514 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 BCO2Q9BYV7 579 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 SLC28A3Q9HAS3 691 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 PUF60Q9UHX1 559 aaKnown RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 DSEQ9UL01 958 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 PCDHB8Q9UN66 801 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 FAM163BP0C2L3 166 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 GNL1P36915 607 aaPredicted RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 SMAD3P84022 425 aaKnown RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 LIMS2Q7Z4I7 341 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 DDX53Q86TM3 631 aaKnown RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 ZNF397Q8NF99 534 aaPredicted RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 SPAG5Q96R06 1193 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 MRPL45Q9BRJ2 306 aaKnown RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 PLVAPQ9BX97 442 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 SDCBP2Q9H190 292 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 SNX25Q9H3E2 840 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 CISHQ9NSE2 258 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 CEP72Q9P209 647 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 FBXL5Q9UKA1 691 aa18.63■□□□□ 0.57
SGCE-206ENST00000445866 AJAP1Q9UKB5 411 aaPredicted RBP18.63■□□□□ 0.57
SGCE-206ENST00000445866 FOXN3O00409 490 aaPredicted RBP18.62■□□□□ 0.57
SGCE-206ENST00000445866 TACC1O75410 805 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 RB1P06400 928 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 TPM1P09493 284 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 RFX1P22670 979 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 TKTP29401 623 aaKnown RBP18.62■□□□□ 0.57
SGCE-206ENST00000445866 CDC25BP30305 580 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 USP8P40818 1118 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 ERVK-21P61565 698 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 YWHAEP62258 255 aaKnown RBP18.62■□□□□ 0.57
SGCE-206ENST00000445866 PLCB3Q01970 1234 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 DRAP1Q14919 205 aaPredicted RBP18.62■□□□□ 0.57
SGCE-206ENST00000445866 USP41Q3LFD5 358 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 FIGNQ5HY92 759 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 KIAA1841Q6NSI8 718 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 ADGRF2Q8IZF7 708 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 TMEM86AQ8N2M4 240 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 SPC24Q8NBT2 197 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 OR6B3Q8NGW1 331 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 JAKMIP2Q96AA8 810 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 IQCDQ96DY2 449 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 SAMD11Q96NU1 681 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 TTPALQ9BTX7 342 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 EDEM3Q9BZQ6 932 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 CERS4Q9HA82 394 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
SGCE-206ENST00000445866 DAAM1Q9Y4D1 1078 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 PCDHB4Q9Y5E5 795 aa18.62■□□□□ 0.57
SGCE-206ENST00000445866 SYN3O14994 580 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 PDGFRBP09619 1106 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 KRT5P13647 590 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 TYMPP19971 482 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 DNAJB2P25686 324 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 PPP2R2DQ66LE6 453 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.61■□□□□ 0.57
SGCE-206ENST00000445866 VPS52Q8N1B4 723 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 TTC39CQ8N584 583 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 TIFAQ96CG3 184 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 B3GALT6Q96L58 329 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 ALG13Q9NP73 1137 aaKnown RBP18.61■□□□□ 0.57
SGCE-206ENST00000445866 CAPN11Q9UMQ6 739 aa18.61■□□□□ 0.57
SGCE-206ENST00000445866 A0A1W2PPC1 479 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 RNF225M0QZC1 329 aaPredicted RBP18.6■□□□□ 0.57
SGCE-206ENST00000445866 CYP11A1P05108 521 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 ACO1P21399 889 aaKnown RBP18.6■□□□□ 0.57
SGCE-206ENST00000445866 FGFR3P22607 806 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 CASP14P31944 242 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 LHX1P48742 406 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 YWHAHQ04917 246 aaPredicted RBP18.6■□□□□ 0.57
SGCE-206ENST00000445866 OVOS1Q6IE37 1185 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.6■□□□□ 0.57
SGCE-206ENST00000445866 THEM5Q8N1Q8 247 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 KBTBD7Q8WVZ9 684 aa18.6■□□□□ 0.57
SGCE-206ENST00000445866 C11orf84Q9BUA3 381 aaPredicted RBP18.6■□□□□ 0.57
SGCE-206ENST00000445866 VN1R3Q9BXE9 311 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms