RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 CENPPQ6IPU0 288 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 SLC8B1Q6J4K2 584 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 ADSSL1Q8N142 457 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 C1orf127Q8N9H9 656 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 KREMEN2Q8NCW0 462 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 CMASQ8NFW8 434 aaPredicted RBP13.19□□□□□ -0.3
LTBR-204ENST00000444814 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 RHOBTB2Q9BYZ6 727 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 CLSTN2Q9H4D0 955 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 CLEC1BQ9P126 229 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 NR2E1Q9Y466 385 aa13.19□□□□□ -0.3
LTBR-204ENST00000444814 I3L4J1 428 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 PRRG1O14668 218 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 MBTPS2O43462 519 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 GLP2RO95838 553 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 CYP11A1P05108 521 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 EPCAMP16422 314 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 PCSK1P29120 753 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 HOXA9P31269 272 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 GTF2H1P32780 548 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 LTBRP36941 435 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 LHX1P48742 406 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 GUCY2FP51841 1108 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 TSPY1Q01534 308 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 PLD1Q13393 1074 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 SMAD2Q15796 467 aaKnown RBP13.18□□□□□ -0.3
LTBR-204ENST00000444814 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 TRAPPC11Q7Z392 1133 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 GLYCTKQ8IVS8 523 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
LTBR-204ENST00000444814 TOP6BLQ8N6T0 577 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 ZNF461Q8TAF7 563 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 PARD3BQ8TEW8 1205 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 TAF4BQ92750 862 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 HPDLQ96IR7 371 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 CEP63Q96MT8 703 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 CLSTN3Q9BQT9 956 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
LTBR-204ENST00000444814 TGM5O43548 720 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 STAU1O95793 577 aaKnown RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 LRG1P02750 347 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 CLCN6P51797 869 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 ARPP19P56211 112 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 CETN1Q12798 172 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 PAK1Q13153 545 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 MORC3Q14149 939 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 MRPL58Q14197 206 aaKnown RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 CLUL1Q15846 466 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 CAMK4Q16566 473 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 RARS2Q5T160 578 aaKnown RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 AFF4Q9UHB7 1163 aaKnown RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 FBXL5Q9UKA1 691 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
LTBR-204ENST00000444814 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
LTBR-204ENST00000444814 BIN1O00499 593 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 ZMYND10O75800 440 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 POU2F2P09086 479 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 BMP1P13497 986 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 KCNQ1P51787 676 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 CLDN10P78369 228 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 MAPRE1Q15691 268 aaKnown RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 SGSM1Q2NKQ1 1148 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 ZCWPW2Q504Y3 356 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 CT47A1Q5JQC4 288 aaPredicted RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 KLHL10Q6JEL2 608 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 LILRA6Q6PI73 481 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 ADAMTS19Q8TE59 1207 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 NELFBQ8WX92 580 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 UHRF1Q96T88 793 aaPredicted RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 ARMCX3Q9UH62 379 aaPredicted RBP13.16□□□□□ -0.3
LTBR-204ENST00000444814 SNX9Q9Y5X1 595 aa13.16□□□□□ -0.3
LTBR-204ENST00000444814 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 N4BP1O75113 896 aaKnown RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 C8AP07357 584 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 ATF2P15336 505 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 SSTR3P32745 418 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 ROR1Q01973 937 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 NFE2Q16621 373 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 CCDC40Q4G0X9 1142 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 ZNF667Q5HYK9 610 aa13.15□□□□□ -0.3
LTBR-204ENST00000444814 LMBRD2Q68DH5 695 aaPredicted RBP13.15□□□□□ -0.3
LTBR-204ENST00000444814 ISM2Q6H9L7 571 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms