RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 PASD1Q8IV76 773 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 NME8Q8N427 588 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 WHAMMQ8TF30 809 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 DDX47Q9H0S4 455 aaKnown RBP16.68■□□□□ 0.26
SNX13-204ENST00000444712 RAB17Q9H0T7 212 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 STRIP2Q9ULQ0 834 aa16.68■□□□□ 0.26
SNX13-204ENST00000444712 PROSCO94903 275 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 WEE2P0C1S8 567 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 DARSP14868 501 aaKnown RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 TM4SF4P48230 202 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 ADAM17P78536 824 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 PTP4A2Q12974 167 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 CRHR2Q13324 411 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 GLIPR1L2Q4G1C9 344 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 KRT35Q92764 455 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 HHIPL1Q96JK4 782 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 BTBD6Q96KE9 485 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 CHORDC1Q9UHD1 332 aaPredicted RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 C17orf102A2RUQ5 167 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 FAM155AB1AL88 458 aaPredicted RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 CA12O43570 354 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 BRD2P25440 801 aaKnown RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 OAS2P29728 719 aaKnown RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 CHRNA3P32297 505 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 FSCN1Q16658 493 aaKnown RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 MMS22LQ6ZRQ5 1243 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.26
SNX13-204ENST00000444712 LHX5Q9H2C1 402 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 DPP3Q9NY33 737 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 HPCAL4Q9UM19 191 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 UTP11Q9Y3A2 253 aaKnown RBP16.67■□□□□ 0.26
SNX13-204ENST00000444712 TRIP11Q15643 1979 aa16.67■□□□□ 0.26
SNX13-204ENST00000444712 CASP8AP2Q9UKL3 1982 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 FAM187AA6NFU0 413 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 PSTPIP1O43586 416 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 PHF2O75151 1096 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 DUSP11O75319 330 aaKnown RBP16.66■□□□□ 0.26
SNX13-204ENST00000444712 NPTXRO95502 500 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 AARSP49588 968 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNX13-204ENST00000444712 FCGRTP55899 365 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 MYO1EQ12965 1108 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 ZNF211Q13398 564 aaPredicted RBP16.66■□□□□ 0.26
SNX13-204ENST00000444712 MAMLD1Q13495 774 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 GSPT2Q8IYD1 628 aaKnown RBP16.66■□□□□ 0.26
SNX13-204ENST00000444712 CXorf38Q8TB03 319 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 FEZF2Q8TBJ5 459 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 KIF12Q96FN5 646 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 FAM114A2Q9NRY5 505 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 IP6K2Q9UHH9 426 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 POLIQ9UNA4 740 aa16.66■□□□□ 0.26
SNX13-204ENST00000444712 TRIP12Q14669 1992 aaPredicted RBP16.66■□□□□ 0.26
SNX13-204ENST00000444712 BHMG1C9JSJ3 638 aaPredicted RBP16.65■□□□□ 0.26
SNX13-204ENST00000444712 ECM2O94769 699 aaPredicted RBP16.65■□□□□ 0.26
SNX13-204ENST00000444712 ITGA4P13612 1032 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 ZNF394Q53GI3 561 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 MFSD14CQ5VZR4 134 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 FAM71BQ8TC56 605 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 IFT81Q8WYA0 676 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 OSMRQ99650 979 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 TRIM6Q9C030 488 aaPredicted RBP16.65■□□□□ 0.26
SNX13-204ENST00000444712 AGAP1Q9UPQ3 857 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 GINS2Q9Y248 185 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
SNX13-204ENST00000444712 CILPO75339 1184 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 CFHP08603 1231 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 MARCKSL1P49006 195 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 MRPS25P82663 173 aaKnown RBP16.65■□□□□ 0.26
SNX13-204ENST00000444712 SCARA3Q6AZY7 606 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 ERICH1Q86X53 443 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 SLC13A5Q86YT5 568 aaPredicted RBP16.65■□□□□ 0.26
SNX13-204ENST00000444712 RHOT1Q8IXI2 618 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 C7orf31Q8N865 590 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 DNAJB3Q8WWF6 145 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 SNX27Q96L92 541 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 AMACRQ9UHK6 382 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 KIAA1257Q9ULG3 409 aa16.65■□□□□ 0.26
SNX13-204ENST00000444712 TLR3O15455 904 aaKnown RBP16.64■□□□□ 0.25
SNX13-204ENST00000444712 XPOTO43592 962 aaKnown RBP16.64■□□□□ 0.25
SNX13-204ENST00000444712 RPLP2P05387 115 aaKnown RBP16.64■□□□□ 0.25
SNX13-204ENST00000444712 CD19P15391 556 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
SNX13-204ENST00000444712 HOXC8P31273 242 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 GBP1P32455 592 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 CARSP49589 748 aaKnown RBP16.64■□□□□ 0.25
SNX13-204ENST00000444712 CRYBB1P53674 252 aaPredicted RBP16.64■□□□□ 0.25
SNX13-204ENST00000444712 RAD23BP54727 409 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 PURAQ00577 322 aaKnown RBP16.64■□□□□ 0.25
SNX13-204ENST00000444712 TMEM62Q0P6H9 643 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 TAF2Q6P1X5 1199 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 DNAJC24Q6P3W2 148 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 RUFY4Q6ZNE9 571 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 MREGQ8N565 214 aa16.64■□□□□ 0.25
SNX13-204ENST00000444712 C1orf131Q8NDD1 294 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms