RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 TRAPPC11Q7Z392 1133 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 ST13P5Q8NFI4 369 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-208ENST00000444677 PGLYRP2Q96PD5 576 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 MYADMQ96S97 322 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 CGRRF1Q99675 332 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 CRISPLD1Q9H336 500 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 CYP4F11Q9HBI6 524 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 CGNQ9P2M7 1197 aaKnown RBP14.59□□□□□ -0.07
GARNL3-208ENST00000444677 DNMT3BQ9UBC3 853 aaKnown RBP14.59□□□□□ -0.07
GARNL3-208ENST00000444677 LIMD1Q9UGP4 676 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 ITGA11Q9UKX5 1188 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 L1RE1Q9UN81 338 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 PLXNA3P51805 1871 aa14.59□□□□□ -0.07
GARNL3-208ENST00000444677 HCRTO43612 131 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 TNNC2P02585 160 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 ASGR2P07307 311 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 HNRNPA1P09651 372 aaKnown RBP eCLIP14.58□□□□□ -0.08
GARNL3-208ENST00000444677 ATF2P15336 505 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 TNNI1P19237 187 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 ELF1P32519 619 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 DLG4P78352 724 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 SURF1Q15526 300 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 DUOXA2Q1HG44 320 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 UVSSAQ2YD98 709 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 SV2CQ496J9 727 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 TMEM31Q5JXX7 168 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 CCDC149Q6ZUS6 474 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 LRRTM3Q86VH5 581 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 OSTM1Q86WC4 334 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 WDR49Q8IV35 697 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 SLC9A9Q8IVB4 645 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 GUF1Q8N442 669 aaKnown RBP14.58□□□□□ -0.08
GARNL3-208ENST00000444677 GOLGA5Q8TBA6 731 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 ELMO3Q96BJ8 720 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 TIGD1Q96MW7 591 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 FNBP1Q96RU3 617 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 RHOBTB2Q9BYZ6 727 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 C11orf16Q9NQ32 467 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 AFF4Q9UHB7 1163 aaKnown RBP14.58□□□□□ -0.08
GARNL3-208ENST00000444677 TRAF3IP3Q9Y228 551 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 NR2E1Q9Y466 385 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 CLUHO75153 1309 aa14.58□□□□□ -0.08
GARNL3-208ENST00000444677 C2orf16Q68DN1 1984 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 OR6C75A6NL08 312 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 LRRIQ3A6PVS8 624 aaPredicted RBP14.57□□□□□ -0.08
GARNL3-208ENST00000444677 NRG2O14511 850 aaPredicted RBP14.57□□□□□ -0.08
GARNL3-208ENST00000444677 DCXO43602 365 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 PRPF40AO75400 957 aaKnown RBP14.57□□□□□ -0.08
GARNL3-208ENST00000444677 SOAT2O75908 522 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 PAX3P23760 479 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 PRCPP42785 496 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 CEP135Q66GS9 1140 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 TPGS2Q68CL5 300 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 POTEHQ6S545 545 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 CYP26C1Q6V0L0 522 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 TCEAL8Q8IYN2 117 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 TTC9BQ8N6N2 239 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 LRRC52Q8N7C0 313 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 TDRD5Q8NAT2 981 aaKnown RBP14.57□□□□□ -0.08
GARNL3-208ENST00000444677 ATAD1Q8NBU5 361 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 SPATA20Q8TB22 786 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 ITFG1Q8TB96 612 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 PARD3BQ8TEW8 1205 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 ZNF560Q96MR9 790 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 LRFN3Q9BTN0 628 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 SMOC2Q9H3U7 446 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 SLC27A5Q9Y2P5 690 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 SNX9Q9Y5X1 595 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 DENND4AQ7Z401 1863 aa14.57□□□□□ -0.08
GARNL3-208ENST00000444677 ARHGEF37A1IGU5 675 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 MTMR11A4FU01 709 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 PRRG1O14668 218 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 CALUO43852 315 aaPredicted RBP14.56□□□□□ -0.08
GARNL3-208ENST00000444677 AKAP3O75969 853 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 HOXA9P31269 272 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 GBP2P32456 591 aaPredicted RBP14.56□□□□□ -0.08
GARNL3-208ENST00000444677 PNPLA4P41247 253 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 DUSP4Q13115 394 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 GPR17Q13304 367 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 CCDC142Q17RM4 750 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 SLC39A12Q504Y0 691 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 ZCWPW2Q504Y3 356 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 C1orf220Q5T0J3 134 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 GET4Q7L5D6 327 aaPredicted RBP14.56□□□□□ -0.08
GARNL3-208ENST00000444677 METTL23Q86XA0 190 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 ZDHHC14Q8IZN3 488 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 HS6ST3Q8IZP7 471 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 SMARCE1Q969G3 411 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 EEF2KMTQ96G04 330 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 CCDC34Q96HJ3 373 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 HPDLQ96IR7 371 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 ZCWPW1Q9H0M4 648 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 TMLHEQ9NVH6 421 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 CEP72Q9P209 647 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 MAN1B1Q9UKM7 699 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 USTQ9Y2C2 406 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 INSL5Q9Y5Q6 135 aa14.56□□□□□ -0.08
GARNL3-208ENST00000444677 VWA8A3KMH1 1905 aa14.55□□□□□ -0.08
GARNL3-208ENST00000444677 KINO60870 393 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms