RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SIX4Q9UIU6 781 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 OR6C75A6NL08 312 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 TEX28O15482 410 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 CLASP2O75122 1294 aaKnown RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 STAU1O95793 577 aaKnown RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 C1RP00736 705 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 PRKCSHP14314 528 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 CPB1P15086 417 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 ELF1P32519 619 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 LHX1P48742 406 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 MYL7Q01449 175 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 NFKBIBQ15653 356 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 WDR72Q3MJ13 1102 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 LLGL2Q6P1M3 1020 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 CD300LGQ6UXG3 332 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 GLYCTKQ8IVS8 523 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 FBXL13Q8NEE6 735 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 LNX1Q8TBB1 728 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 ZNF516Q92618 1163 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 CNOT6LQ96LI5 555 aaKnown RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 DZANK1Q9NVP4 752 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 MTRRQ9UBK8 725 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 NXF1Q9UBU9 619 aaKnown RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 TIMM13Q9Y5L4 95 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 PRRC2BQ5JSZ5 2229 aaKnown RBP15.14■□□□□ 0.01
SSBP3-208ENST00000444533 CDH23Q9H251 3354 aa15.14■□□□□ 0.01
SSBP3-208ENST00000444533 SPTLC1O15269 473 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 LILRB3O75022 631 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 OAZ2O95190 189 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 CST3P01034 146 aaPredicted RBP15.13■□□□□ 0.01
SSBP3-208ENST00000444533 HLA-DRAP01903 254 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 CYP11A1P05108 521 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 PCSK1P29120 753 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
SSBP3-208ENST00000444533 OR1D2P34982 312 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 MARSP56192 900 aaKnown RBP15.13■□□□□ 0.01
SSBP3-208ENST00000444533 ARPP19P56211 112 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 MYL6P60660 151 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 TPM4P67936 248 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 TSPY1Q01534 308 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 MYL5Q02045 173 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 LIN9Q5TKA1 542 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 PALB2Q86YC2 1186 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 PLEKHO2Q8TD55 490 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 BORCS6Q96GS4 357 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 SNX25Q9H3E2 840 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 PLEKHA4Q9H4M7 779 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 FAM50BQ9Y247 325 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 CDY1Q9Y6F8 540 aa15.13■□□□□ 0.01
SSBP3-208ENST00000444533 SYCE3A1L190 88 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 SMTNL1A8MU46 457 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 BECN2A8MW95 431 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 PES1O00541 588 aaKnown RBP15.12■□□□□ 0.01
SSBP3-208ENST00000444533 P4HA2O15460 535 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 CAVIN2O95810 425 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 AFPP02771 609 aaKnown RBP15.12■□□□□ 0.01
SSBP3-208ENST00000444533 FAM163BP0C2L3 166 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 HOXB8P17481 243 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-208ENST00000444533 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
SSBP3-208ENST00000444533 CLCN4P51793 760 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 PPP3CAQ08209 521 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 ADAM15Q13444 863 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 WSCD1Q658N2 575 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 CCDC149Q6ZUS6 474 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 DCP1BQ8IZD4 617 aaKnown RBP15.12■□□□□ 0.01
SSBP3-208ENST00000444533 ADGRF2Q8IZF7 708 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 TMEM130Q8N3G9 435 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 FAM84AQ96KN4 292 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 DNAJC25Q9H1X3 360 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 UBE2ZQ9H832 354 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-208ENST00000444533 VRTNQ9H8Y1 702 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 RAB20Q9NX57 234 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 FBXL5Q9UKA1 691 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 MAFFQ9ULX9 164 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 NFE2L3Q9Y4A8 694 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 HCFC2Q9Y5Z7 792 aa15.12■□□□□ 0.01
SSBP3-208ENST00000444533 CDK11BP21127 795 aaKnown RBP15.11■□□□□ 0.01
SSBP3-208ENST00000444533 KCNA5P22460 613 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 IGFBP6P24592 240 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-208ENST00000444533 FMO5P49326 533 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 KCNH2Q12809 1159 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 SMARCB1Q12824 385 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 RAB33AQ14088 237 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 MRPL58Q14197 206 aaKnown RBP15.11■□□□□ 0.01
SSBP3-208ENST00000444533 ANO6Q4KMQ2 910 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 TPGS2Q68CL5 300 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 CES5AQ6NT32 575 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 TRIM59Q8IWR1 403 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 CXorf38Q8TB03 319 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 HDAC7Q8WUI4 952 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 SLC35C1Q96A29 364 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 CLSTN3Q9BQT9 956 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 GZF1Q9H116 711 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-208ENST00000444533 DDX43Q9NXZ2 648 aaKnown RBP15.11■□□□□ 0.01
SSBP3-208ENST00000444533 THEGQ9P2T0 379 aa15.11■□□□□ 0.01
SSBP3-208ENST00000444533 TRANK1O15050 2925 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms