RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 ALLCQ8N6M5 410 aa16.32■□□□□ 0.2
AP1S3-206ENST00000443700 ACER1Q8TDN7 264 aa16.32■□□□□ 0.2
AP1S3-206ENST00000443700 SLC7A6OSQ96CW6 309 aaPredicted RBP16.32■□□□□ 0.2
AP1S3-206ENST00000443700 NUDCD1Q96RS6 583 aa16.32■□□□□ 0.2
AP1S3-206ENST00000443700 SPATS2LQ9NUQ6 558 aaKnown RBP16.32■□□□□ 0.2
AP1S3-206ENST00000443700 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
AP1S3-206ENST00000443700 DRG1Q9Y295 367 aaKnown RBP16.32■□□□□ 0.2
AP1S3-206ENST00000443700 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.32■□□□□ 0.2
AP1S3-206ENST00000443700 WDR64B1ANS9 1081 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 H0YCG3 227 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 TYROBPO43914 113 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 SKAP2O75563 359 aaPredicted RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ICAM1P05362 532 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 CD58P19256 250 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 PTPN7P35236 360 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 GJC1P36383 396 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 SSR1P43307 286 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ARSEP51690 589 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 NOMO3P69849 1222 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 KRT76Q01546 638 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 GHRHRQ02643 423 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ZRSR2Q15696 482 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 SEPT7Q16181 437 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ZC3H12AQ5D1E8 599 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 C15orf39Q6ZRI6 1047 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 NLRP9Q7RTR0 991 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ASAP3Q8TDY4 903 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 MASTLQ96GX5 879 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 SENP7Q9BQF6 1050 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 DCLRE1BQ9H816 532 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 NKX1-2Q9UD57 310 aaPredicted RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ZNF148Q9UQR1 794 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ALOX15BO15296 676 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 KRT1P04264 644 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 PECAM1P16284 738 aaPredicted RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 MARK3P27448 753 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 RXRBP28702 533 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 RPA3P35244 121 aaPredicted RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 PCK1P35558 622 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 CCDC142Q17RM4 750 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 EFHC2Q5JST6 749 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ZNF449Q6P9G9 518 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 PRUNE1Q86TP1 453 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 C4orf33Q8N1A6 199 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 SAMD3Q8N6K7 520 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ALKBH8Q96BT7 664 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 PCDH9Q9HC56 1237 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 SLCO1B3Q9NPD5 702 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 CYLDQ9NQC7 956 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 PARVAQ9NVD7 372 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
AP1S3-206ENST00000443700 ANKFY1Q9P2R3 1169 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 USTQ9Y2C2 406 aa16.31■□□□□ 0.2
AP1S3-206ENST00000443700 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 TM9SF1O15321 606 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 EPHB2P29323 1055 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 ABL2P42684 1182 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 CCNHP51946 323 aaPredicted RBP16.3■□□□□ 0.2
AP1S3-206ENST00000443700 GEMIN4P57678 1058 aaKnown RBP16.3■□□□□ 0.2
AP1S3-206ENST00000443700 GPS1Q13098 491 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 MAMLD1Q13495 774 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 KLHL38Q2WGJ6 581 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 LRRC38Q5VT99 294 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 DHX37Q8IY37 1157 aaKnown RBP16.3■□□□□ 0.2
AP1S3-206ENST00000443700 ABRAQ8N0Z2 381 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 FEZF2Q8TBJ5 459 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 ZNF75CPQ92670 426 aaPredicted RBP16.3■□□□□ 0.2
AP1S3-206ENST00000443700 SLITRK1Q96PX8 696 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 FAM118BQ9BPY3 351 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 NTPCRQ9BSD7 190 aaKnown RBP16.3■□□□□ 0.2
AP1S3-206ENST00000443700 PI4K2AQ9BTU6 479 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 STOML1Q9UBI4 398 aa16.3■□□□□ 0.2
AP1S3-206ENST00000443700 KDM4FA0A1W2PPD8 638 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 LRRD1A4D1F6 860 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 DKC1O60832 514 aaKnown RBP eCLIP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 T-ENOLP0DO92 83 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 GNA15P30679 374 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 SLC1A5Q15758 541 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 UGCGQ16739 394 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 TBC1D10BQ4KMP7 808 aaPredicted RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 TAF1BQ53T94 588 aaPredicted RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 BRDTQ58F21 947 aaPredicted RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 ZFYVE27Q5T4F4 411 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 RNASEH2BQ5TBB1 312 aaKnown RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 SLC39A4Q6P5W5 647 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 OTOAQ7RTW8 1153 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 ZBED8Q8IZ13 594 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 ATP11CQ8NB49 1132 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms