RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MPZL3Q6UWV2 235 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 CACNA2D4Q7Z3S7 1137 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 GPIHBP1Q8IV16 184 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 NECAB1Q8N987 351 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 ZFYVE19Q96K21 471 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 ZC3H10Q96K80 434 aaKnown RBP15.72■□□□□ 0.11
HMGN1-208ENST00000443046 FREM2Q5SZK8 3169 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 ANKRD11Q6UB99 2663 aaPredicted RBP15.71■□□□□ 0.11
HMGN1-208ENST00000443046 KCNK5O95279 499 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 LARGE1O95461 756 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 PROS1P07225 676 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 OR4Q2P0C623 313 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 LRPAP1P30533 357 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 EPHB3P54753 998 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 YWHAHQ04917 246 aaPredicted RBP15.71■□□□□ 0.11
HMGN1-208ENST00000443046 DUSP4Q13115 394 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 MAPK7Q13164 816 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 ANKRD1Q15327 319 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 CCDC6Q16204 474 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 HAUS3Q68CZ6 603 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 CENPPQ6IPU0 288 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 PKN3Q6P5Z2 889 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 KBTBD6Q86V97 674 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 TMEM130Q8N3G9 435 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 C4orf32Q8N8J7 132 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 TTC8Q8TAM2 541 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 PSMG2Q969U7 264 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
HMGN1-208ENST00000443046 NTPCRQ9BSD7 190 aaKnown RBP15.71■□□□□ 0.11
HMGN1-208ENST00000443046 TUBGCP4Q9UGJ1 667 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 RBM19Q9Y4C8 960 aaKnown RBP15.71■□□□□ 0.11
HMGN1-208ENST00000443046 ASB3Q9Y575 518 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 PCDHGA5Q9Y5G8 931 aa15.71■□□□□ 0.11
HMGN1-208ENST00000443046 OR6C75A6NL08 312 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 CCDC169A6NNP5 214 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 JAK2O60674 1132 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 RPP40O75818 363 aaKnown RBP15.7■□□□□ 0.1
HMGN1-208ENST00000443046 AKAP3O75969 853 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 MARCKSP29966 332 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-208ENST00000443046 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
HMGN1-208ENST00000443046 PLCB2Q00722 1185 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 TNK2Q07912 1038 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 ZBTB6Q15916 424 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 DNAJB7Q7Z6W7 309 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-208ENST00000443046 C12orf50Q8NA57 414 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-208ENST00000443046 CHFRQ96EP1 664 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 PGLYRP2Q96PD5 576 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 TCHPQ9BT92 498 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 HSFX1Q9UBD0 423 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 KIAA1024Q9UPX6 916 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 TIMM13Q9Y5L4 95 aaPredicted RBP15.7■□□□□ 0.1
HMGN1-208ENST00000443046 LAMA5O15230 3695 aa15.7■□□□□ 0.1
HMGN1-208ENST00000443046 ATG2BQ96BY7 2078 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 HIP1RO75146 1068 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 TOM1L1O75674 476 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 PRAMEF12O95522 483 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 FGF19O95750 216 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 KCNA4P22459 653 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 CCT6AP40227 531 aaKnown RBP15.69■□□□□ 0.1
HMGN1-208ENST00000443046 ALDH1A3P47895 512 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 DMP1Q13316 513 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-208ENST00000443046 MYBPC2Q14324 1141 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 ZNF174Q15697 407 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 ITPRIPL2Q3MIP1 535 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 TMEM196Q5HYL7 178 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 BPIFB1Q8TDL5 484 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 TMEM209Q96SK2 561 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 C17orf75Q9HAS0 396 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 KMT5AQ9NQR1 393 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 DDX19AQ9NUU7 478 aaKnown RBP15.69■□□□□ 0.1
HMGN1-208ENST00000443046 WASF3Q9UPY6 502 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 SLC27A5Q9Y2P5 690 aa15.69■□□□□ 0.1
HMGN1-208ENST00000443046 TTC26A0AVF1 554 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 MTMR11A4FU01 709 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 DPYSL4O14531 572 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 CYP3A5P20815 502 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 PXNP49023 591 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-208ENST00000443046 TRIM29Q14134 588 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 PDIA5Q14554 519 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 SEZ6Q53EL9 994 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 GPR158Q5T848 1215 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 FSTL4Q6MZW2 842 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 TTC9BQ8N6N2 239 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 ATAD1Q8NBU5 361 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 FAM200AQ8TCP9 573 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 FAM83CQ9BQN1 747 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 ATXN3LQ9H3M9 355 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 PLEKHA5Q9HAU0 1116 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 IL21Q9HBE4 155 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 VPS45Q9NRW7 570 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 DENND4CQ5VZ89 1909 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 PKD1L2Q7Z442 2459 aa15.68■□□□□ 0.1
HMGN1-208ENST00000443046 FASNP49327 2511 aaKnown RBP15.67■□□□□ 0.1
HMGN1-208ENST00000443046 TRDMT1O14717 391 aaKnown RBP15.67■□□□□ 0.1
HMGN1-208ENST00000443046 ATG13O75143 517 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 TYMPP19971 482 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 GABRR2P28476 465 aa15.67■□□□□ 0.1
HMGN1-208ENST00000443046 MPLP40238 635 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms