RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 OAZ2O95190 189 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 ODC1P11926 461 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 EPCAMP16422 314 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 TYMPP19971 482 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 PAX3P23760 479 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 KLRC2P26717 231 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 GTF2H1P32780 548 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 CLCN4P51793 760 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 TRPC3Q13507 836 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 SKIV2LQ15477 1246 aaKnown RBP17.23■□□□□ 0.35
USP39-205ENST00000442708 SOWAHAQ2M3V2 549 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
USP39-205ENST00000442708 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 CT47A1Q5JQC4 288 aaPredicted RBP17.23■□□□□ 0.35
USP39-205ENST00000442708 TCERG1LQ5VWI1 586 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 ANKS3Q6ZW76 656 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 PALB2Q86YC2 1186 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 PDCL2Q8N4E4 241 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 APPL2Q8NEU8 664 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 FEZF2Q8TBJ5 459 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 CDCA3Q99618 268 aaPredicted RBP17.23■□□□□ 0.35
USP39-205ENST00000442708 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 EMILIN2Q9BXX0 1053 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 METTL14Q9HCE5 456 aaKnown RBP17.23■□□□□ 0.35
USP39-205ENST00000442708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP39-205ENST00000442708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP39-205ENST00000442708 SAMSN1Q9NSI8 373 aaKnown RBP17.23■□□□□ 0.35
USP39-205ENST00000442708 CLDND1Q9NY35 253 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 POLIQ9UNA4 740 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 SNX9Q9Y5X1 595 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 BACE2Q9Y5Z0 518 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 HCFC2Q9Y5Z7 792 aa17.23■□□□□ 0.35
USP39-205ENST00000442708 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.22■□□□□ 0.35
USP39-205ENST00000442708 TBX10O75333 385 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 STAU1O95793 577 aaKnown RBP17.22■□□□□ 0.35
USP39-205ENST00000442708 SPATA31D3P0C874 917 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 OR1D2P34982 312 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 NDUFV1P49821 464 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 YWHAHQ04917 246 aaPredicted RBP17.22■□□□□ 0.35
USP39-205ENST00000442708 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 CTXN3Q4LDR2 81 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 OVOS1Q6IE37 1185 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 PDXDC1Q6P996 788 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 LILRA6Q6PI73 481 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 SPATA31D4Q6ZUB0 917 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 USP37Q86T82 979 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 OSTM1Q86WC4 334 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 ENOX1Q8TC92 643 aaKnown RBP17.22■□□□□ 0.35
USP39-205ENST00000442708 KBTBD7Q8WVZ9 684 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 PPP2R3CQ969Q6 453 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 PABPC5Q96DU9 382 aaKnown RBP17.22■□□□□ 0.35
USP39-205ENST00000442708 CNOT6LQ96LI5 555 aaKnown RBP17.22■□□□□ 0.35
USP39-205ENST00000442708 TMEM209Q96SK2 561 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 THAP9Q9H5L6 903 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 CLEC1BQ9P126 229 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 BARX2Q9UMQ3 279 aaPredicted RBP17.22■□□□□ 0.35
USP39-205ENST00000442708 CDY1Q9Y6F8 540 aa17.22■□□□□ 0.35
USP39-205ENST00000442708 TGM5O43548 720 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 HCRTO43612 131 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 FGFR1OPO95684 399 aaKnown RBP17.21■□□□□ 0.35
USP39-205ENST00000442708 GNA14O95837 355 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 ADH1AP07327 375 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 OR4Q2P0C623 313 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 ATICP31939 592 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 PIK3CAP42336 1068 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 MXI1P50539 228 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 ZNF699Q32M78 642 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 ZSCAN23Q3MJ62 389 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 ANO6Q4KMQ2 910 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 KRT39Q6A163 491 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 SLC8B1Q6J4K2 584 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 TMEM184AQ6ZMB5 413 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 EP400NLQ6ZTU2 488 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 OR10T2Q8NGX3 314 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 UBE2ZQ9H832 354 aaPredicted RBP17.21■□□□□ 0.35
USP39-205ENST00000442708 VRTNQ9H8Y1 702 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 APOBEC3GQ9HC16 384 aaKnown RBP17.21■□□□□ 0.35
USP39-205ENST00000442708 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 NME7Q9Y5B8 376 aa17.21■□□□□ 0.35
USP39-205ENST00000442708 H7C4K7 107 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 STX10O60499 249 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 HUS1O60921 280 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 ASS1P00966 412 aaKnown RBP17.2■□□□□ 0.34
USP39-205ENST00000442708 FMO5P49326 533 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 CREMQ03060 361 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 RAB33AQ14088 237 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
USP39-205ENST00000442708 SGSM1Q2NKQ1 1148 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 ZNF280DQ6N043 979 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 TOP6BLQ8N6T0 577 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 SDCBP2Q9H190 292 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 NXF1Q9UBU9 619 aaKnown RBP17.2■□□□□ 0.34
USP39-205ENST00000442708 DSEQ9UL01 958 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
USP39-205ENST00000442708 XIRP2A4UGR9 3374 aa17.2■□□□□ 0.34
USP39-205ENST00000442708 WDR27A2RRH5 827 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms