RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LRRIQ3A6PVS8 624 aaPredicted RBP16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 PPP1R3GB7ZBB8 358 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 CYB561D2O14569 222 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 AKAP3O75969 853 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 ABLIM3O94929 683 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 STAU1O95793 577 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 KRT13P13646 458 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 UVSSAQ2YD98 709 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 TPGS2Q68CL5 300 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 ANKRD40Q6AI12 368 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 ISM2Q6H9L7 571 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 OVOS1Q6IE37 1185 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 CES5AQ6NT32 575 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 RSPO2Q6UXX9 243 aaPredicted RBP16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 C15orf39Q6ZRI6 1047 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 DPH6Q7L8W6 267 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 METTL23Q86XA0 190 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 GLYCTKQ8IVS8 523 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 FAM186BQ8IYM0 893 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 PLEKHO2Q8TD55 490 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 ZNF516Q92618 1163 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 POP1Q99575 1024 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 NUP62CLQ9H1M0 184 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 ZDHHC7Q9NXF8 308 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 SPDYE4A6NLX3 237 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 BIN1O00499 593 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 SLC16A3O15427 465 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 ADAM12O43184 909 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 HOXA9P31269 272 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 ATICP31939 592 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 MTHFRP42898 656 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 VAMP7P51809 220 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 ROR1Q01973 937 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 BFSP1Q12934 665 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 CLUL1Q15846 466 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 TMEM86AQ8N2M4 240 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 TOP6BLQ8N6T0 577 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 HPDLQ96IR7 371 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 RIPOR3Q96MK2 946 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 NECTIN4Q96NY8 510 aa16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 USP15Q9Y4E8 981 aaPredicted RBP16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 TIMM13Q9Y5L4 95 aaPredicted RBP16.18■□□□□ 0.18
CSNK1E-210ENST00000442216 WDR27A2RRH5 827 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 HUS1O60921 280 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 ZMYND10O75800 440 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 MBD3O95983 291 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 C4BPAP04003 597 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 FAM163BP0C2L3 166 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 IL9P15248 144 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 ATF2P15336 505 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 PMS1P54277 932 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 TRPC3Q13507 836 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 ATAT1Q5SQI0 421 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 RARS2Q5T160 578 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 LIN9Q5TKA1 542 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 CCDC149Q6ZUS6 474 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 GPR149Q86SP6 731 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 THEM5Q8N1Q8 247 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 CEP63Q96MT8 703 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 VRTNQ9H8Y1 702 aa16.17■□□□□ 0.18
CSNK1E-210ENST00000442216 TRIM49BA6NDI0 452 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 PHACTR2O75167 634 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 CST3P01034 146 aaPredicted RBP16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 POU2F2P09086 479 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 HNRNPA1P09651 372 aaKnown RBP eCLIP16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 GTF2H1P32780 548 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 DLG4P78352 724 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 SMARCB1Q12824 385 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 PAK1Q13153 545 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 GPR17Q13304 367 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 CBX2Q14781 532 aaPredicted RBP16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 ZACNQ401N2 412 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 TDRD10Q5VZ19 366 aaKnown RBP16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 TTI2Q6NXR4 508 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 LIMS2Q7Z4I7 341 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 TCEAL8Q8IYN2 117 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 MLKLQ8NB16 471 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 GPT2Q8TD30 523 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 ADAMTS19Q8TE59 1207 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 NELFBQ8WX92 580 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 FAM84AQ96KN4 292 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 PRKD2Q9BZL6 878 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 AFF4Q9UHB7 1163 aaKnown RBP16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 SNX9Q9Y5X1 595 aa16.16■□□□□ 0.18
CSNK1E-210ENST00000442216 CCDC195A0A1B0GUA6 201 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 STX10O60499 249 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 SPATA31D3P0C874 917 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 CPB1P15086 417 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 ELF1P32519 619 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 LHX1P48742 406 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 BIRC3Q13489 604 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 C1orf220Q5T0J3 134 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 WSCD1Q658N2 575 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 SCARA3Q6AZY7 606 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
CSNK1E-210ENST00000442216 SPATA31D4Q6ZUB0 917 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms