RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TNPO1Q92973 898 aaKnown RBP5.39□□□□□ -1.55
PTPN4-206ENST00000441089 MTMR8Q96EF0 704 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 WDR89Q96FK6 387 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-206ENST00000441089 LIN37Q96GY3 246 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-206ENST00000441089 FAM84AQ96KN4 292 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 SPZ1Q9BXG8 430 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 RNF26Q9BY78 433 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-206ENST00000441089 RIOX1Q9H6W3 641 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 ZFYVE1Q9HBF4 777 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 ABCB6Q9NP58 842 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 ENTPD7Q9NQZ7 604 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 ARHGEF3Q9NR81 526 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 SEMA4GQ9NTN9 838 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 TMEM260Q9NX78 707 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 PNMA2Q9UL42 364 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 CA14Q9ULX7 337 aa5.39□□□□□ -1.55
PTPN4-206ENST00000441089 UBR5O95071 2799 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-206ENST00000441089 MYH15Q9Y2K3 1946 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 ASCC3Q8N3C0 2202 aaKnown RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 VPS37CA5D8V6 355 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 EIF1AYO14602 144 aaKnown RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 TREHO43280 583 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 ARIH2O95376 493 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 DEXIO95424 95 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 F13A1P00488 732 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 ICAM1P05362 532 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 ZNF286BP0CG31 522 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 ZSCAN22P10073 491 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 GNAQP50148 359 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 SNAP25P60880 206 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 NUCB2P80303 420 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 BMS1Q14692 1282 aaKnown RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 MLANAQ16655 118 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 PAN2Q504Q3 1202 aaKnown RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 RARS2Q5T160 578 aaKnown RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 GPATCH4Q5T3I0 446 aaKnown RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 FYB2Q5VWT5 728 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 PLPP4Q5VZY2 271 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 WWC2Q6AWC2 1192 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 FAM173BQ6P4H8 233 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 BTNL9Q6UXG8 535 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 FAM43BQ6ZT52 329 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 THNSL1Q8IYQ7 743 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 ADGRF4Q8IZF3 695 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 CELF5Q8N6W0 485 aaKnown RBP5.38□□□□□ -1.55
PTPN4-206ENST00000441089 FBXO18Q8NFZ0 1043 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 PPTC7Q8NI37 304 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 CCDC74AQ96AQ1 378 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 MISP3Q96FF7 219 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 C8orf76Q96K31 380 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 PIGSQ96S52 555 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 TCF25Q9BQ70 676 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 LZTS2Q9BRK4 669 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 FTHL17Q9BXU8 183 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 OSBPL6Q9BZF3 934 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 NIF3L1Q9GZT8 377 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 JMJD4Q9H9V9 463 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 VAT1LQ9HCJ6 419 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 RXFP3Q9NSD7 469 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 VPS54Q9P1Q0 977 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 CDH22Q9UJ99 828 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 KCNJ14Q9UNX9 436 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 HCFC2Q9Y5Z7 792 aa5.38□□□□□ -1.55
PTPN4-206ENST00000441089 C2CD3Q4AC94 2353 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 LRRK2Q5S007 2527 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 FLNCQ14315 2725 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 TMPRSS2O15393 492 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 NARSO43776 548 aaKnown RBP5.37□□□□□ -1.55
PTPN4-206ENST00000441089 KCNK5O95279 499 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 SCG2P13521 617 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 GLULP15104 373 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PDCP20941 246 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 CALML3P27482 149 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 SMARCA1P28370 1054 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 HOXC8P31273 242 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PPM1AP35813 382 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 OXCT1P55809 520 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PLCB3Q01970 1234 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 KRT17Q04695 432 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PRKCQQ04759 706 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PPP2R5DQ14738 602 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 LY6KQ17RY6 165 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 QRICH1Q2TAL8 776 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 RPS26P11Q5JNZ5 115 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-206ENST00000441089 EARS2Q5JPH6 523 aaKnown RBP5.37□□□□□ -1.55
PTPN4-206ENST00000441089 SYDE2Q5VT97 1194 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 DCLRE1AQ6PJP8 1040 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 RNF207Q6ZRF8 634 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 CLEC17AQ6ZS10 378 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 TMC7Q7Z402 723 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PDZD3Q86UT5 571 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 FERMT3Q86UX7 667 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 HOMER1Q86YM7 354 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 LRRC56Q8IYG6 542 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-206ENST00000441089 MRPS27Q92552 414 aaKnown RBP5.37□□□□□ -1.55
PTPN4-206ENST00000441089 SLC38A3Q99624 504 aa5.37□□□□□ -1.55
PTPN4-206ENST00000441089 PHF20Q9BVI0 1012 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms