RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 KRIT1O00522 736 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 MAGEB2O15479 319 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 DDX3YO15523 660 aaKnown RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 CLDN3O15551 220 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 CYP26A1O43174 497 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 STRNO43815 780 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 HSF2BPO75031 334 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 LSM8O95777 96 aaKnown RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 GH1P01241 217 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 IGHA2P01877 340 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 C4BPAP04003 597 aaKnown RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 KRT5P13647 590 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 CHRNB2P17787 502 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 MAN1A1P33908 653 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 CTNNA1P35221 906 aaKnown RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 SLC1A1P43005 524 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PHKA2P46019 1235 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 NSFP46459 744 aaKnown RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 DNA2P51530 1060 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PTPN5P54829 565 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PTENP60484 403 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 TNFAIP2Q03169 654 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 MTMR3Q13615 1198 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 LAMC2Q13753 1193 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PLCB4Q15147 1175 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 SPDYCQ5MJ68 293 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PRAMEF19Q5SWL8 479 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 LIN9Q5TKA1 542 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 ACAD10Q6JQN1 1059 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 MPZL3Q6UWV2 235 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 ARMCX2Q7L311 632 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 APBB1IPQ7Z5R6 666 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 SLC47A2Q86VL8 602 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PALB2Q86YC2 1186 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 FBXO16Q8IX29 292 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 ZSWIM2Q8NEG5 633 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PPTC7Q8NI37 304 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 MAIP1Q8WWC4 291 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 KAT5Q92993 513 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 LRRC45Q96CN5 670 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 MS4A14Q96JA4 679 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 VCPIP1Q96JH7 1222 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 KRT12Q99456 494 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 TARS2Q9BW92 718 aaKnown RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 OSGEPQ9NPF4 335 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 FAM114A2Q9NRY5 505 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 EHD2Q9NZN4 543 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PHF24Q9UPV7 400 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 CNTN6Q9UQ52 1028 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 IVNS1ABPQ9Y6Y0 642 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 CNTNAP2Q9UHC6 1331 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 DMDP11532 3685 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 PDCD11Q14690 1871 aaKnown RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 CITO14578 2027 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 RBM47A0AV96 593 aaKnown RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 BHMG1C9JSJ3 638 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 H3BQF6 201 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 RAD51CO43502 376 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 SPOPO43791 374 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 PHF2O75151 1096 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 PHACTR2O75167 634 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 ARIH2O95376 493 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 MMEP08473 750 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 TXNP10599 105 aaKnown RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 PROZP22891 400 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 CHRNA3P32297 505 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 GUCY2DQ02846 1103 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 LAMTOR4Q0VGL1 99 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 PPFIA1Q13136 1202 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 NCOA4Q13772 614 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 FAM187BQ17R55 369 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 LY6KQ17RY6 165 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 WDR78Q5VTH9 848 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 CRELD2Q6UXH1 353 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 TSHZ1Q6ZSZ6 1077 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 SND1Q7KZF4 910 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 PRPF31Q8WWY3 499 aaKnown RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 DDX1Q92499 740 aaKnown RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 SEC14L1Q92503 715 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 ACO2Q99798 780 aaKnown RBP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 NUP85Q9BW27 656 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 TAS2R14Q9NYV8 317 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 PARP2Q9UGN5 583 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 TBX21Q9UL17 535 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 MTUS1Q9ULD2 1270 aa9.74□□□□□ -0.85
HDAC6-209ENST00000440653 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC6-209ENST00000440653 A6NNZ2 444 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ZBTB42B2RXF5 422 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ACKR2O00590 384 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 SEPT4O43236 478 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 PSTPIP1O43586 416 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 ZEB2O60315 1214 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 FAM189A1O60320 539 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 SORBS3O60504 671 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 B4GALT4O60513 344 aa9.73□□□□□ -0.85
HDAC6-209ENST00000440653 RNF40O75150 1001 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms