RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ATXN2Q99700 1313 aaKnown RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 MYH11P35749 1972 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 A0A1W2PPC1 479 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 GOLGA8IPA6NC78 632 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 GOLGA8JA6NMD2 632 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 HIDE1A8MVS5 230 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ZNF263O14978 683 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 HNRNPDLO14979 420 aaKnown RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TSPAN1O60635 241 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TBCAO75347 108 aaKnown RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ITGB1P05556 798 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 CAPN2P17655 700 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 JAM2P57087 298 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ERVFC1P60507 584 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ADAM9Q13443 819 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 HERC4Q5GLZ8 1057 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TCEAL5Q5H9L2 206 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 MEI1Q5TIA1 1274 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 RASIP1Q5U651 963 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 LMBRD2Q68DH5 695 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 GLB1LQ6UWU2 654 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 RRAGAQ7L523 313 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ECHDC2Q86YB7 292 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 GPIHBP1Q8IV16 184 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ZBTB8OSQ8IWT0 167 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 IFT20Q8IY31 132 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 EFCAB13Q8IY85 973 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 C12orf76Q8N812 135 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 RDM1Q8NG50 284 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ACTRT1Q8TDG2 376 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 WHAMMQ8TF30 809 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 CEP89Q96ST8 783 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 MMS19Q96T76 1030 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SH3GL2Q99962 352 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 FGFBP2Q9BYJ0 223 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 LACRTQ9GZZ8 138 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 MIOSQ9NXC5 875 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 KCNG1Q9UIX4 513 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 DBR1Q9UK59 544 aaKnown RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 BARX2Q9UMQ3 279 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 IPPQ9Y573 584 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 EP300Q09472 2414 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SIP14410 1827 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ARID2Q68CP9 1835 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 WDR81Q562E7 1941 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 FAM170AA1A519 330 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 C9IYK1 514 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SHOX2O60902 331 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 FGF18O76093 207 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 DDHD2O94830 711 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SEC31AO94979 1220 aaKnown RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 GCNT3O95395 438 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 STAG3L1P0CL83 205 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ITGA4P13612 1032 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ATF7P17544 494 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 GBP1P32455 592 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ACTN2P35609 894 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ACOT2P49753 483 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 NDUFV1P49821 464 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 PTENP60484 403 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TNNC1P63316 161 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 MBTD1Q05BQ5 628 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TFDP1Q14186 410 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 MXD4Q14582 209 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ZNF568Q3ZCX4 644 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ARSHQ5FYA8 562 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ZBTB41Q5SVQ8 909 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 CCDC181Q5TID7 509 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 KIAA1841Q6NSI8 718 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 DPY19L2P1Q6NXN4 242 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 AGMOQ6ZNB7 445 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SLFN11Q7Z7L1 901 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SPATS2Q86XZ4 545 aaKnown RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 PALB2Q86YC2 1186 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 DAW1Q8N136 415 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ZSWIM2Q8NEG5 633 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SPATA4Q8NEY3 305 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TCP11Q8WWU5 503 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 BORCS6Q96GS4 357 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TMEM169Q96HH4 297 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 RPS6KC1Q96S38 1066 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TCF25Q9BQ70 676 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 SELENOOQ9BVL4 669 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 GDF3Q9NR23 364 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 STIM2Q9P246 746 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TMEM59LQ9UK28 342 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ADAM21Q9UKJ8 722 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 HPCAL4Q9UM19 191 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 TIMM13Q9Y5L4 95 aaPredicted RBP5.1□□□□□ -1.59
EDEM3-203ENST00000439962 MTCH2Q9Y6C9 303 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 NCANO14594 1321 aa5.1□□□□□ -1.59
EDEM3-203ENST00000439962 ZFHX2Q9C0A1 2572 aaPredicted RBP5.09□□□□□ -1.59
EDEM3-203ENST00000439962 DOCK6Q96HP0 2047 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 MYO10Q9HD67 2058 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 MUC6Q6W4X9 2439 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 ASPMQ8IZT6 3477 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 A0A0U1RQF3 1178 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.09□□□□□ -1.59
EDEM3-203ENST00000439962 ARL5CA6NH57 179 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 LPXNO60711 386 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms