RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CBWD2Q8IUF1 395 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CD302Q8IX05 232 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 REXO1L1PQ8IX06 675 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIAA0319LQ8IZA0 1049 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 C17orf53Q8N3J3 647 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 PCSK9Q8NBP7 692 aaKnown RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 FBXL13Q8NEE6 735 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIF18AQ8NI77 898 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 LMBR1Q8WVP7 490 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRAPPC12Q8WVT3 735 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KAT2BQ92831 832 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CCDC127Q96BQ5 260 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SAAL1Q96ER3 474 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 C16orf45Q96MC5 204 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 NLRP4Q96MN2 994 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SCLT1Q96NL6 688 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 NT5C1BQ96P26 610 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TSPAN18Q96SJ8 248 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 CHP1Q99653 195 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SLC30A3Q99726 388 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TUBB2BQ9BVA1 445 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SEZ6LQ9BYH1 1024 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 GSX2Q9BZM3 304 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMEM117Q9H0C3 514 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 IKZF4Q9H2S9 585 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 HAUS4Q9H6D7 363 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 NLRC4Q9NPP4 1024 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SETD4Q9NVD3 440 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SAGE1Q9NXZ1 904 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 RBAKQ9NYW8 714 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 ANKFY1Q9P2R3 1169 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 SRRDQ9UH36 339 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 DNAJC12Q9UKB3 198 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 TNFSF13BQ9Y275 285 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 KCNMB2Q9Y691 235 aa4.28□□□□□ -1.72
HMGB1P37-201ENST00000439613 MYH10P35580 1976 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 SCN10AQ9Y5Y9 1956 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 DNAH12Q6ZR08 3092 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ANK1P16157 1881 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 A0A087WZ62 844 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 A0A1B0GUA9 196 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 USP27XA6NNY8 438 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 LRRIQ3A6PVS8 624 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 F8VZ95 297 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 RBAK-RBAKDNI3L0D1 243 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 M0QZ92 97 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 EPHB6O15197 1021 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PJA2O43164 708 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 FKTNO75072 461 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PHACTR2O75167 634 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 XYLBO75191 536 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 SASH3O75995 380 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TBC1D8O95759 1140 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TNNC2P02585 160 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 VTNP04004 478 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ADRB2P07550 413 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 C6orf222P0C671 652 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CYP2C9P11712 490 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ACTN1P12814 892 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PROZP22891 400 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 EIF4BP23588 611 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TBXAS1P24557 533 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 YY1P25490 414 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CST5P28325 142 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CTGFP29279 349 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 AXLP30530 894 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 HOXC8P31273 242 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 SOX5P35711 763 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 MAGEA1P43355 309 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ACOT2P49753 483 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 KIF11P52732 1056 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 VAV2P52735 878 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CRYBB1P53674 252 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 NLRP11P59045 1033 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CHMP4BP1P59074 171 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 BPIFB4P59827 614 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 GNG11P61952 73 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 DLG4P78352 724 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PURAQ00577 322 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 GCNT1Q02742 428 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 MAP2K1Q02750 393 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PRKCZQ05513 592 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 PTPN11Q06124 597 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CACNB2Q08289 660 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 SPEM2Q0P670 501 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CCINQ13939 588 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 BMS1Q14692 1282 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 MTF1Q14872 753 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 DRAP1Q14919 205 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC18A3Q16572 532 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 DUOXA2Q1HG44 320 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 SGSM1Q2NKQ1 1148 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 DCAF4L1Q3SXM0 396 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF568Q3ZCX4 644 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZACNQ401N2 412 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CBWD6Q4V339 395 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 TDRD12Q587J7 1177 aaKnown RBP4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CBWD3Q5JTY5 395 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 CBWD5Q5RIA9 395 aa4.27□□□□□ -1.73
HMGB1P37-201ENST00000439613 MAP3K21Q5TCX8 1036 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms