RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 ZNF667Q5HYK9 610 aa10.71□□□□□ -0.69
CBX5-202ENST00000439541 IRF2BP2Q7Z5L9 587 aa10.71□□□□□ -0.69
CBX5-202ENST00000439541 ZNF280BQ86YH2 543 aa10.71□□□□□ -0.69
CBX5-202ENST00000439541 OLIG1Q8TAK6 271 aa10.71□□□□□ -0.69
CBX5-202ENST00000439541 TBC1D13Q9NVG8 400 aa10.71□□□□□ -0.69
CBX5-202ENST00000439541 ZNF446Q9NWS9 450 aa10.71□□□□□ -0.69
CBX5-202ENST00000439541 LRFN2Q9ULH4 789 aa10.71□□□□□ -0.69
CBX5-202ENST00000439541 CCDC85CA6NKD9 419 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 PODXLO00592 558 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 XPOTO43592 962 aaKnown RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 HCRTO43612 131 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 DDHD2O94830 711 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 EOMESO95936 686 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 EPHB4P54760 987 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ZNF394Q53GI3 561 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 NOMO2Q5JPE7 1267 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 FAM117BQ6P1L5 589 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 CYP26C1Q6V0L0 522 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 OTOP2Q7RTS6 562 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 SLC47A2Q86VL8 602 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 CRIPAKQ8N1N5 446 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 TMEM199Q8N511 208 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 UBR7Q8N806 425 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ACRBPQ8NEB7 543 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 SLC20A1Q8WUM9 679 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 CARD6Q9BX69 1037 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 HAUS4Q9H6D7 363 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 CISHQ9NSE2 258 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ZNHIT6Q9NWK9 470 aaKnown RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 AIPL1Q9NZN9 384 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 DNAJB4Q9UDY4 337 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 PCDHB7Q9Y5E2 793 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 SNX9Q9Y5X1 595 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 MRFAP1Q9Y605 127 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 TDRD15B5MCY1 1934 aaKnown RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 A0A0U1RQJ8 604 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 I3L4J1 428 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 INPPL1O15357 1258 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ZRANB2O95218 330 aaKnown RBP eCLIP10.7□□□□□ -0.7
CBX5-202ENST00000439541 ITGB1P05556 798 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 CYP3A5P20815 502 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 TBXAS1P24557 533 aaPredicted RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 LRPAP1P30533 357 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ATICP31939 592 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 EIF4A3P38919 411 aaKnown RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 PBX3P40426 434 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 WDR5P61964 334 aaKnown RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 TNNC1P63316 161 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 PTK2Q05397 1052 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 KLHL30Q0D2K2 578 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 IKBKEQ14164 716 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 TSR1Q2NL82 804 aaKnown RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 TEX35Q5T0J7 233 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 TMEM270Q6UE05 265 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 C16orf59Q7L2K0 433 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ZNF571Q7Z3V5 609 aaPredicted RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 DNAAF5Q86Y56 855 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 FAM71AQ8IYT1 594 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ABI1Q8IZP0 508 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 LRRC52Q8N7C0 313 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 RBBP8NLQ8NC74 664 aaPredicted RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 ATRIPQ8WXE1 791 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 SYN2Q92777 582 aaPredicted RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 ZNF560Q96MR9 790 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 CASD1Q96PB1 797 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 TWNKQ96RR1 684 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 MMS19Q96T76 1030 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 BCO2Q9BYV7 579 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 ELAC1Q9H777 363 aaKnown RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 VRTNQ9H8Y1 702 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 NHEJ1Q9H9Q4 299 aaPredicted RBP10.7□□□□□ -0.7
CBX5-202ENST00000439541 UBN1Q9NPG3 1134 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 SLC38A7Q9NVC3 462 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 MYO6Q9UM54 1294 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 PCDHB4Q9Y5E5 795 aa10.7□□□□□ -0.7
CBX5-202ENST00000439541 TBKBP1A7MCY6 615 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 KIF5CO60282 957 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 KIF4AO95239 1232 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 SERPING1P05155 500 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 FERP16591 822 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 TAF6P49848 677 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 TTC3P53804 2025 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 LILRA4P59901 499 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 MYO1EQ12965 1108 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 PTPRSQ13332 1948 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 TUSC3Q13454 348 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 UPP1Q16831 310 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 ENOSF1Q7L5Y1 443 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 NOP9Q86U38 636 aaKnown RBP10.69□□□□□ -0.7
CBX5-202ENST00000439541 PALB2Q86YC2 1186 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 NPAS4Q8IUM7 802 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 URGCPQ8TCY9 931 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 EPS8L1Q8TE68 723 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 TAF4BQ92750 862 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 GOLGA1Q92805 767 aa10.69□□□□□ -0.7
CBX5-202ENST00000439541 MRPL45Q9BRJ2 306 aaKnown RBP10.69□□□□□ -0.7
CBX5-202ENST00000439541 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
CBX5-202ENST00000439541 IL23AQ9NPF7 189 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms