RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RILPQ96NA2 401 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RAB3IPQ96QF0 476 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RANBP17Q9H2T7 1088 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 EBF2Q9HAK2 575 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 SCOCQ9UIL1 159 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 ASAP2O43150 1006 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 CYP11B1P15538 503 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RWDD2BP57060 319 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 CNTN2Q02246 1040 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 SPDYE2Q495Y8 402 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 ARHGEF18Q6ZSZ5 1173 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RHOT2Q8IXI1 618 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RTKN2Q8IZC4 609 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 LRRC71Q8N4P6 559 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 PHC3Q8NDX5 983 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 HES6Q96HZ4 224 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RBM15Q96T37 977 aaKnown RBP eCLIP10.5□□□□□ -0.735e-10■■■□□ 14.7
CDC42SE1-202ENST00000439374 RIT2Q99578 217 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCDC77Q9BR77 488 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 TRABDQ9H4I3 376 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RNF19AQ9NV58 838 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 ETAA1Q9NY74 926 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 LNPEPQ9UIQ6 1025 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 CNOT7Q9UIV1 285 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 BTAF1O14981 1849 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 C5orf60A6NFR6 353 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 RALAP11233 206 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 PRKCIP41743 596 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 GMPSP49915 693 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 PRKCEQ02156 737 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ITIH4Q14624 930 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 PGM5Q15124 567 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 BBS9Q3SYG4 887 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ANGEL2Q5VTE6 544 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 SNX30Q5VWJ9 437 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 LVRNQ6Q4G3 990 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 GADL1Q6ZQY3 521 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ANO5Q75V66 913 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 PPFIBP2Q8ND30 876 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 UTP4Q969X6 686 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 DNAJC1Q96KC8 554 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 NLRP4Q96MN2 994 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 MBOAT7Q96N66 472 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 IMPG2Q9BZV3 1241 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 HACL1Q9UJ83 578 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 SCN7AQ01118 1682 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 WEE2P0C1S8 567 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 GHRP10912 638 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ADRA1DP25100 572 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 JAM2P57087 298 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZBTB41Q5SVQ8 909 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 LRRC6Q86X45 466 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLC13A5Q86YT5 568 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 EPS8L1Q8TE68 723 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 CRYGNQ8WXF5 182 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 MSTO1Q9BUK6 570 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 TBC1D22BQ9NU19 505 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 GINM1Q9NU53 330 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 TXLNGQ9NUQ3 528 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 NMRK1Q9NWW6 199 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 CHKBQ9Y259 395 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 DDX60LQ5H9U9 1706 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ARAP2Q8WZ64 1704 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 H3BRJ5 948 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 INO80B-WBP1J3KQ70 363 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 GAS8O95995 478 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCNFP41002 786 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 BNIP1Q12981 228 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 BTNL9Q6UXG8 535 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 USP37Q86T82 979 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 TRIM50Q86XT4 487 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 GLIS1Q8NBF1 620 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 SCG3Q8WXD2 468 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ATP6V0A1Q93050 837 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZSWIM1Q9BR11 485 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 INO80BQ9C086 356 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZWILCHQ9H900 591 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 RXFP1Q9HBX9 757 aa10.49□□□□□ -0.73
CDC42SE1-202ENST00000439374 MAPK13O15264 365 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 LUC7L3O95232 432 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CFHP08603 1231 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 KRT4P19013 534 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CHRNA3P32297 505 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 GCLCP48506 637 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 NEK3P51956 506 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CACNA2D1P54289 1103 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 GPS1Q13098 491 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZNF268Q14587 947 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLMAPQ14BN4 828 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PIP4K2CQ8TBX8 421 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PLVAPQ9BX97 442 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLC13A1Q9BZW2 595 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 VCXQ9H320 206 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZNF395Q9H8N7 513 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZNF408Q9H9D4 720 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 RNPEPL1Q9HAU8 725 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 NINJ2Q9NZG7 142 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms