RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 EFEMP2O95967 443 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 CCDC172P0C7W6 258 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 JAM2P57087 298 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 GSDMDP57764 484 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 INCA1Q0VD86 236 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 LRMPQ12912 555 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 TIGD5Q53EQ6 642 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
SCLT1-202ENST00000439369 SCARA3Q6AZY7 606 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 SPOPLQ6IQ16 392 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 DSTYKQ6XUX3 929 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 UBR7Q8N806 425 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 BAP1Q92560 729 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 IGSF21Q96ID5 467 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 KREMEN1Q96MU8 473 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 SPAG5Q96R06 1193 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
SCLT1-202ENST00000439369 PRO3102Q9H379 93 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 MARCH5Q9NX47 278 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 PRG3Q9Y2Y8 225 aaPredicted RBP13.58□□□□□ -0.24
SCLT1-202ENST00000439369 FHOD1Q9Y613 1164 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 F8VZ95 297 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 RB1P06400 928 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 LINC00271P0C7V0 271 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 WARSP23381 471 aaKnown RBP13.57□□□□□ -0.24
SCLT1-202ENST00000439369 STAT1P42224 750 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 PLCB3Q01970 1234 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 DRAP1Q14919 205 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-202ENST00000439369 SOWAHAQ2M3V2 549 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 FUT10Q6P4F1 479 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-202ENST00000439369 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 METTL23Q86XA0 190 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 TMEM169Q96HH4 297 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 MMS19Q96T76 1030 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 CISHQ9NSE2 258 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 CACNG4Q9UBN1 327 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 BARX2Q9UMQ3 279 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-202ENST00000439369 L1RE1Q9UN81 338 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 POLIQ9UNA4 740 aa13.57□□□□□ -0.24
SCLT1-202ENST00000439369 MKI67P46013 3256 aaKnown RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 LINC01553A4QN01 128 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 AKR1B15C9JRZ8 316 aaPredicted RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 C5orf67F2Z3F1 127 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 GABRDO14764 452 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 MFAP3LO75121 409 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 ITGB1P05556 798 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 ACO1P21399 889 aaKnown RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 FGFR3P22607 806 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 HNRNPH3P31942 346 aaKnown RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 CASP14P31944 242 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 SOX5P35711 763 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 BMPR1AP36894 532 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 LHX1P48742 406 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 BPIFB4P59827 614 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 SMAD3P84022 425 aaKnown RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 APBA1Q02410 837 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 KRT17Q04695 432 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 RAPGEF1Q13905 1077 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 TSR1Q2NL82 804 aaKnown RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 PDXDC1Q6P996 788 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 GJB7Q6PEY0 223 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 FAM71AQ8IYT1 594 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 RNF168Q8IYW5 571 aaPredicted RBP13.56□□□□□ -0.24
SCLT1-202ENST00000439369 ADGRF2Q8IZF7 708 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 TMEM130Q8N3G9 435 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 OR8K1Q8NGG5 319 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 DNAJC7Q99615 494 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 AIPL1Q9NZN9 384 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 MSRAQ9UJ68 235 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 KIAA1257Q9ULG3 409 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 LZTS1Q9Y250 596 aa13.56□□□□□ -0.24
SCLT1-202ENST00000439369 CILPO75339 1184 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 CAPN15O75808 1086 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 OAZ2O95190 189 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 PAEPP09466 180 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 FERP16591 822 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 PCSK1P29120 753 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 KRT9P35527 623 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 BRCC3P46736 316 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 ZNF132P52740 706 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 UBE3AQ05086 875 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 ARHGAP44Q17R89 818 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 SCARA5Q6ZMJ2 495 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 KBTBD7Q8WVZ9 684 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 RABGGTAQ92696 567 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 KAT5Q92993 513 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 PANX2Q96RD6 677 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 TGS1Q96RS0 853 aaKnown RBP13.55□□□□□ -0.24
SCLT1-202ENST00000439369 PPP1R9BQ96SB3 815 aa13.55□□□□□ -0.24
SCLT1-202ENST00000439369 ARID3AQ99856 593 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms