RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNF720Q7Z2F6 126 aa16.64■□□□□ 0.26
DHFR-201ENST00000439211 MTDHQ86UE4 582 aaKnown RBP16.64■□□□□ 0.26
DHFR-201ENST00000439211 UTP4Q969X6 686 aaKnown RBP16.64■□□□□ 0.26
DHFR-201ENST00000439211 ACCSQ96QU6 501 aa16.64■□□□□ 0.26
DHFR-201ENST00000439211 NEK3P51956 506 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 HPCAP84074 193 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 DMPKQ09013 629 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 EPC2Q52LR7 807 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 CYP4F22Q6NT55 531 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 XXYLT1Q8NBI6 393 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 ZNF564Q8TBZ8 553 aaPredicted RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 CBWD1Q9BRT8 395 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 POLR3CQ9BUI4 534 aaPredicted RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 FBXO28Q9NVF7 368 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 PPP1R1BQ9UD71 204 aaPredicted RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 A0A0J9YVX5 310 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 MIF4GDA9UHW6 222 aaKnown RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 POC1B-GALNT4F8VUJ3 575 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 NDUFB5O43674 189 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 ZWINTO95229 277 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 MARCKSL1P49006 195 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 PPIDQ08752 370 aaKnown RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 MAPK7Q13164 816 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 PODNQ7Z5L7 613 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 PHF12Q96QT6 1004 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 FAM118BQ9BPY3 351 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 UTP6Q9NYH9 597 aaKnown RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 TBX10O75333 385 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 LDHAP00338 332 aaKnown RBP16.64■□□□□ 0.25
DHFR-201ENST00000439211 NPR1P16066 1061 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 ECHS1P30084 290 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 MAPK4P31152 587 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 CHRNA3P32297 505 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 SERPINB6P35237 376 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 ZBTB17Q13105 803 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 MTFR1Q15390 333 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 CLUL1Q15846 466 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 C4orf50Q6ZRC1 276 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 POMGNT1Q8WZA1 660 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 KAT5Q92993 513 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 ADAM33Q9BZ11 813 aa16.64■□□□□ 0.25
DHFR-201ENST00000439211 ROBO1Q9Y6N7 1651 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 FAM187AA6NFU0 413 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 PODXLO00592 558 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 CLDN3O15551 220 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 GAS8O95995 478 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 CCNB1P14635 433 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 EIF2AK2P19525 551 aaKnown RBP16.63■□□□□ 0.25
DHFR-201ENST00000439211 HOXD13P35453 343 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 AP1B1Q10567 949 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 SPARCL1Q14515 664 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 C2CD6Q53TS8 623 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 B3GNT6Q6ZMB0 384 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 SATL1Q86VE3 508 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 ALG3Q92685 438 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 ERVK-5Q9HDB9 667 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 TUFT1Q9NNX1 390 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 ANAPC7Q9UJX3 599 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
DHFR-201ENST00000439211 ARHGAP10A1A4S6 786 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 ASMTLO95671 621 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 NUDT17P0C025 328 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 ANXA13P27216 316 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 SSTR3P32745 418 aaPredicted RBP16.63■□□□□ 0.25
DHFR-201ENST00000439211 MFAP3P55082 362 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 PTENP60484 403 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 DLG4P78352 724 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 MOXD1Q6UVY6 613 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 KRT27Q7Z3Y8 459 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 WDR75Q8IWA0 830 aaKnown RBP16.63■□□□□ 0.25
DHFR-201ENST00000439211 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 MAGEB18Q96M61 343 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 SEL1LQ9UBV2 794 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 ZNF148Q9UQR1 794 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 DIS3Q9Y2L1 958 aaKnown RBP16.63■□□□□ 0.25
DHFR-201ENST00000439211 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 H0YIN7 160 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 ECE2O60344 883 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 TNNI1P19237 187 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 PDE1BQ01064 536 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 DHX34Q14147 1143 aaKnown RBP16.63■□□□□ 0.25
DHFR-201ENST00000439211 FOXR2Q6PJQ5 311 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 OTOP1Q7RTM1 612 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 USP37Q86T82 979 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 PPP2R3CQ969Q6 453 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 NDUFA13Q9P0J0 144 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 USP20Q9Y2K6 914 aa16.63■□□□□ 0.25
DHFR-201ENST00000439211 A0A0A6YYK5 440 aaPredicted RBP16.62■□□□□ 0.25
DHFR-201ENST00000439211 SPECC1L-ADORA2AF8WAN1 911 aa16.62■□□□□ 0.25
DHFR-201ENST00000439211 SGPL1O95470 568 aa16.62■□□□□ 0.25
DHFR-201ENST00000439211 CTNNA2P26232 953 aa16.62■□□□□ 0.25
DHFR-201ENST00000439211 AOC3Q16853 763 aa16.62■□□□□ 0.25
DHFR-201ENST00000439211 KAZNQ674X7 775 aa16.62■□□□□ 0.25
DHFR-201ENST00000439211 NLRP9Q7RTR0 991 aa16.62■□□□□ 0.25
DHFR-201ENST00000439211 NT5C1BQ96P26 610 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms