RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 R3HDMLQ9H3Y0 253 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 CISHQ9NSE2 258 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 IRF6O14896 467 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 OGTO15294 1046 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 ARIH2O95376 493 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 WEE2P0C1S8 567 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 OSTNP61366 133 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 MXD4Q14582 209 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-214ENST00000439122 ATP13A4Q4VNC1 1196 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 TAOK1Q7L7X3 1001 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 ARMC9Q7Z3E5 817 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 CACNA2D3Q8IZS8 1091 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 NLGN2Q8NFZ4 835 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 PWWP2AQ96N64 755 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 MCEEQ96PE7 176 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 NIF3L1Q9GZT8 377 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
HDAC8-214ENST00000439122 PTPRFP10586 1907 aa12.86□□□□□ -0.35
HDAC8-214ENST00000439122 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CPP00450 1065 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 TCF4P15884 667 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 ATF7P17544 494 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CETN2P41208 172 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CAV1Q03135 178 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 NFX1Q12986 1120 aaKnown RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 KYNUQ16719 465 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 TMEM132AQ24JP5 1023 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 ZNF568Q3ZCX4 644 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CDCA2Q69YH5 1023 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 DNAJC24Q6P3W2 148 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 DCUN1D2Q6PH85 259 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 C6orf89Q6UWU4 347 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CCDC89Q8N998 374 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 GPR20Q99678 358 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 ROPN1BQ9BZX4 212 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 ROPN1Q9HAT0 212 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 TMEM51Q9NW97 253 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CAPN7Q9Y6W3 813 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 TMEM191CA6NGB0 347 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 H0YHG0 523 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 TTC4O95801 387 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 CALB1P05937 261 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 TMEM191BP0C7N4 346 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 KRT10P13645 584 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 DRD4P21917 467 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 GRM1Q13255 1194 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 MFSD5Q6N075 450 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 GPAT2Q6NUI2 795 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 PRUNE1Q86TP1 453 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 THNSL1Q8IYQ7 743 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 UBR7Q8N806 425 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 TMEM35BQ8NCS4 154 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 IPO4Q8TEX9 1081 aaKnown RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 PRMT1Q99873 361 aaKnown RBP12.85□□□□□ -0.35
HDAC8-214ENST00000439122 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
HDAC8-214ENST00000439122 C5orf60A6NFR6 353 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 ADM5C9JUS6 153 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 F8VP50 259 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 LSM8O95777 96 aaKnown RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 KRT1P04264 644 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 GJB1P08034 283 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 MCL1Q07820 350 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 PDE4CQ08493 712 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 CCDC121Q6ZUS5 278 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 CDR2LQ86X02 465 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 RCOR2Q8IZ40 523 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 ASCC2Q9H1I8 757 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 NEU2Q9Y3R4 380 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 IVNS1ABPQ9Y6Y0 642 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 IFNAR2P48551 515 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 TNFAIP8L3Q5GJ75 292 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 CELF3Q5SZQ8 465 aaKnown RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 CYP4A22Q5TCH4 519 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 IZUMO3Q5VZ72 239 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 SULF1Q8IWU6 871 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 BBOF1Q8ND07 529 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 KAT2BQ92831 832 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 RBM41Q96IZ5 413 aaKnown RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 SERPINB12Q96P63 405 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 SLITRK1Q96PX8 696 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms