RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FNBP1Q96RU3 617 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 MTMR12Q9C0I1 747 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 INTS13Q9NVM9 706 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 AGAP1Q9UPQ3 857 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 SORCS3Q9UPU3 1222 aa26.68■■□□□ 1.86
RAPGEF1-206ENST00000438647 PRPF40AO75400 957 aaKnown RBP26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 RHOBTB3O94955 611 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 TNNC2P02585 160 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 PRR29P0C7W0 189 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 RBP5P82980 135 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 ZXDAP98168 799 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 DUOXA2Q1HG44 320 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 CSGALNACT2Q8N6G5 542 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 RDH13Q8NBN7 331 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 C11orf16Q9NQ32 467 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 LIMD1Q9UGP4 676 aa26.67■■□□□ 1.86
RAPGEF1-206ENST00000438647 SCN1AP35498 2009 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 FAM86C2PA6NEL3 165 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 PRR33A8MZF0 331 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 KRT19P08727 400 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 FSHRP23945 695 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 ADCY1Q08828 1119 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 MTMR3Q13615 1198 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 GET4Q7L5D6 327 aaPredicted RBP26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 THEM5Q8N1Q8 247 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 LRFN3Q9BTN0 628 aa26.66■■□□□ 1.86
RAPGEF1-206ENST00000438647 EXOC3O60645 756 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 CYP24A1Q07973 514 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 GPR17Q13304 367 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 KCNB1Q14721 858 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 PSMD6Q15008 389 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 UBALD2Q8IYN6 164 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 FMR1NBQ8N0W7 255 aaPredicted RBP26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 TMEM174Q8WUU8 243 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 BORCS6Q96GS4 357 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 EPS15L1Q9UBC2 864 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 INSL5Q9Y5Q6 135 aa26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 ZFP37Q9Y6Q3 630 aaPredicted RBP26.65■■□□□ 1.86
RAPGEF1-206ENST00000438647 TRIOO75962 3097 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 PDXKO00764 312 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 N4BP1O75113 896 aaKnown RBP26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 DLATP10515 647 aaKnown RBP26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 TNNI1P19237 187 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 FAM160A1Q05DH4 1040 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 MYO1EQ12965 1108 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 LMBRD2Q68DH5 695 aaPredicted RBP26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 RNF19BQ6ZMZ0 732 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 ELMOD1Q8N336 334 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 IGSF9Q9P2J2 1179 aa26.64■■□□□ 1.86
RAPGEF1-206ENST00000438647 SEC24AO95486 1093 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 BFSP1Q12934 665 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 PABPC1LQ4VXU2 614 aaKnown RBP26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 WSCD1Q658N2 575 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 TRIM67Q6ZTA4 783 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 SLC9A9Q8IVB4 645 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 OR5B17Q8NGF7 314 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 CXorf38Q8TB03 319 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 MYADMQ96S97 322 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 CGRRF1Q99675 332 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 KCTD10Q9H3F6 313 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 SIX4Q9UIU6 781 aa26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 HOOK1Q9UJC3 728 aaKnown RBP26.63■■□□□ 1.85
RAPGEF1-206ENST00000438647 CALUO43852 315 aaPredicted RBP26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 HUS1O60921 280 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 ASGR2P07307 311 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 OR4Q2P0C623 313 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 PTPN2P17706 415 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 ANP32AP39687 249 aaKnown RBP26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 SIGLEC14Q08ET2 396 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 PLD1Q13393 1074 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 TMEM86AQ8N2M4 240 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 NXPE3Q969Y0 559 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 CCDC127Q96BQ5 260 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 MFSD14AQ96MC6 490 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 RMND1Q9NWS8 449 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 GDAP2Q9NXN4 497 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 DNMT3BQ9UBC3 853 aaKnown RBP26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 PTPRJQ12913 1337 aa26.62■■□□□ 1.85
RAPGEF1-206ENST00000438647 LAMP2P13473 410 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 NTHL1P78549 312 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 SMARCB1Q12824 385 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 SNW1Q13573 536 aaKnown RBP26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 IQCEQ6IPM2 695 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 ENGASEQ8NFI3 743 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 OR10T2Q8NGX3 314 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 SPATA18Q8TC71 538 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 PGLYRP2Q96PD5 576 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 KCNK12Q9HB15 430 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 AVENQ9NQS1 362 aaPredicted RBP26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 DMAC2Q9NW81 257 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 HCFC1R1Q9NWW0 138 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 CDH7Q9ULB5 785 aa26.61■■□□□ 1.85
RAPGEF1-206ENST00000438647 TSC2P49815 1807 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 RHOP08100 348 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 TWF1Q12792 350 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 TRAPPC11Q7Z392 1133 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 GUF1Q8N442 669 aaKnown RBP26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 TOP6BLQ8N6T0 577 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 HPDLQ96IR7 371 aa26.6■■□□□ 1.85
RAPGEF1-206ENST00000438647 FAM84AQ96KN4 292 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms