RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 FAM171A1Q5VUB5 890 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 PDE12Q6L8Q7 609 aaKnown RBP19.72■□□□□ 0.75
HDAC6-208ENST00000438518 BCL7CQ8WUZ0 217 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-208ENST00000438518 CRACR2AQ9BSW2 395 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 PI4K2AQ9BTU6 479 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 BCO2Q9BYV7 579 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 GPR62Q9BZJ7 368 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 XPO4Q9C0E2 1151 aaKnown RBP19.72■□□□□ 0.75
HDAC6-208ENST00000438518 APOBEC3GQ9HC16 384 aaKnown RBP19.72■□□□□ 0.75
HDAC6-208ENST00000438518 CHST7Q9NS84 486 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 NXF1Q9UBU9 619 aaKnown RBP19.72■□□□□ 0.75
HDAC6-208ENST00000438518 SIK3Q9Y2K2 1263 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 ITIH6Q6UXX5 1313 aa19.72■□□□□ 0.75
HDAC6-208ENST00000438518 VWA8A3KMH1 1905 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 F8W810 466 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 TEX33O43247 280 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 SLC9A1P19634 815 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 ASPAP45381 313 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 LHX1P48742 406 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 CREMQ03060 361 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 CUL2Q13617 745 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 FIGNQ5HY92 759 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 ANKS3Q6ZW76 656 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 TMEM130Q8N3G9 435 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 PPM1KQ8N3J5 372 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 MMS19Q96T76 1030 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 TTPALQ9BTX7 342 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 NUP58Q9BVL2 599 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 TRIM5Q9C035 493 aa19.71■□□□□ 0.75
HDAC6-208ENST00000438518 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDAC6-208ENST00000438518 COL4A4P53420 1690 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-208ENST00000438518 LAMA2P24043 3122 aaKnown RBP19.7■□□□□ 0.74
HDAC6-208ENST00000438518 FSD2A1L4K1 749 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 H7C4K7 107 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 URODP06132 367 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 CTSAP10619 480 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 TRIM21P19474 475 aaKnown RBP19.7■□□□□ 0.74
HDAC6-208ENST00000438518 WARSP23381 471 aaKnown RBP19.7■□□□□ 0.74
HDAC6-208ENST00000438518 PBX1P40424 430 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 GLUD2P49448 558 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 MFAP3P55082 362 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 DSG1Q02413 1049 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 YWHAHQ04917 246 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-208ENST00000438518 GPM6BQ13491 265 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 SCARA3Q6AZY7 606 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 SPOPLQ6IQ16 392 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 KIAA1841Q6NSI8 718 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 GPR153Q6NV75 609 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 NEK11Q8NG66 645 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 MRFAP1L1Q96HT8 127 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 PCMTD1Q96MG8 357 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-208ENST00000438518 LSM14BQ9BX40 385 aaKnown RBP19.7■□□□□ 0.74
HDAC6-208ENST00000438518 ZBP1Q9H171 429 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 ZNF576Q9H609 170 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 NGRNQ9NPE2 291 aaKnown RBP19.7■□□□□ 0.74
HDAC6-208ENST00000438518 MTUS1Q9ULD2 1270 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 L1RE1Q9UN81 338 aa19.7■□□□□ 0.74
HDAC6-208ENST00000438518 OAZ2O95190 189 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 INCA1Q0VD86 236 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 SOWAHAQ2M3V2 549 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 KLHDC7AQ5VTJ3 777 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 ZNF280DQ6N043 979 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 PHLDB3Q6NSJ2 640 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 UNC93AQ86WB7 457 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 FMNL3Q8IVF7 1028 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 ADGRF2Q8IZF7 708 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 VPS52Q8N1B4 723 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 THEM5Q8N1Q8 247 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 PDCL2Q8N4E4 241 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 SPPL3Q8TCT6 385 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 ARNTL2Q8WYA1 636 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 PIK3R5Q8WYR1 880 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 EDEM3Q9BZQ6 932 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 SIX2Q9NPC8 291 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 TLR9Q9NR96 1032 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 MRPL17Q9NRX2 175 aaKnown RBP19.69■□□□□ 0.74
HDAC6-208ENST00000438518 IRAK3Q9Y616 596 aa19.69■□□□□ 0.74
HDAC6-208ENST00000438518 I3L4J1 428 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 GABRDO14764 452 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 LRRN2O75325 713 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 UCHL3P15374 230 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 IGFBP6P24592 240 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-208ENST00000438518 TKTP29401 623 aaKnown RBP19.68■□□□□ 0.74
HDAC6-208ENST00000438518 LRMPQ12912 555 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 MRPL58Q14197 206 aaKnown RBP19.68■□□□□ 0.74
HDAC6-208ENST00000438518 VARS2Q5ST30 1063 aaKnown RBP19.68■□□□□ 0.74
HDAC6-208ENST00000438518 OVOS1Q6IE37 1185 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 POF1BQ8WVV4 589 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 TATDN2Q93075 761 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 VN1R3Q9BXE9 311 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 GRPEL1Q9HAV7 217 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 UBE2TQ9NPD8 197 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-208ENST00000438518 POLIQ9UNA4 740 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.68■□□□□ 0.743e-8■■■□□ 16.4
HDAC6-208ENST00000438518 BACE2Q9Y5Z0 518 aa19.68■□□□□ 0.74
HDAC6-208ENST00000438518 LPXNO60711 386 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 PCSK1P29120 753 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 MRE11P49959 708 aa19.67■□□□□ 0.74
HDAC6-208ENST00000438518 TRIM14Q14142 442 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms