RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
SNHG3-202ENST00000437681 CTC1Q2NKJ3 1217 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 TDRD10Q5VZ19 366 aaKnown RBP12.33□□□□□ -0.44
SNHG3-202ENST00000437681 SV2AQ7L0J3 742 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 ZSWIM2Q8NEG5 633 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 LNX1Q8TBB1 728 aaPredicted RBP12.33□□□□□ -0.44
SNHG3-202ENST00000437681 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 HPDLQ96IR7 371 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 SENP8Q96LD8 212 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 KLHL5Q96PQ7 755 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 TCF25Q9BQ70 676 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 BCO2Q9BYV7 579 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 XYLT2Q9H1B5 865 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 ABCB6Q9NP58 842 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 ENTPD7Q9NQZ7 604 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 LIMA1Q9UHB6 759 aaKnown RBP12.33□□□□□ -0.44
SNHG3-202ENST00000437681 AGAP1Q9UPQ3 857 aa12.33□□□□□ -0.44
SNHG3-202ENST00000437681 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 HUS1O60921 280 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 CXCL14O95715 111 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 PCSK1P29120 753 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 NCOA4Q13772 614 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 ZSCAN23Q3MJ62 389 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 DSTYKQ6XUX3 929 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 PABPC5Q96DU9 382 aaKnown RBP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 IQCDQ96DY2 449 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 CNOT6LQ96LI5 555 aaKnown RBP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 ACBD6Q9BR61 282 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 UQCRHLA0A096LP55 91 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 UQCRHP07919 91 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 HNRNPA1P09651 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 DLATP10515 647 aaKnown RBP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 FMO5P49326 533 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 WNT7BP56706 349 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 MYL7Q01449 175 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 MEA1Q16626 185 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 KLHL10Q6JEL2 608 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 DCP1BQ8IZD4 617 aaKnown RBP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 GDPD5Q8WTR4 605 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 MED15Q96RN5 788 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 CXCL16Q9H2A7 254 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 PRDM12Q9H4Q4 367 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 AVENQ9NQS1 362 aaPredicted RBP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 PRG3Q9Y2Y8 225 aaPredicted RBP12.32□□□□□ -0.44
SNHG3-202ENST00000437681 PTPRJQ12913 1337 aa12.32□□□□□ -0.44
SNHG3-202ENST00000437681 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.31□□□□□ -0.44
SNHG3-202ENST00000437681 SOBPA7XYQ1 873 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
SNHG3-202ENST00000437681 PHACTR2O75167 634 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 FOSL2P15408 326 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 ZNF18P17022 549 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 DNAJB1P25685 340 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 INCA1Q0VD86 236 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 ADAM15Q13444 863 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 PSMD5Q16401 504 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 KIAA1841Q6NSI8 718 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 TMC7Q7Z402 723 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 IRF2BP1Q8IU81 584 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 FMNL3Q8IVF7 1028 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 C3orf58Q8NDZ4 430 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 RAB20Q9NX57 234 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 ZDHHC7Q9NXF8 308 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 FBXL5Q9UKA1 691 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 CDH9Q9ULB4 789 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 DNAH12Q6ZR08 3092 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 CYB561D2O14569 222 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 ABLIM3O94929 683 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 VNN1O95497 513 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 HLA-DRAP01903 254 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 TNNC1P63316 161 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 YWHAHQ04917 246 aaPredicted RBP12.31□□□□□ -0.44
SNHG3-202ENST00000437681 TCP11X2Q5H9J9 407 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
SNHG3-202ENST00000437681 LILRA6Q6PI73 481 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 LRSAM1Q6UWE0 723 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 CCDC149Q6ZUS6 474 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 CCDC127Q96BQ5 260 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 FUBP3Q96I24 572 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNHG3-202ENST00000437681 ZCWPW1Q9H0M4 648 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 COMMD8Q9NX08 183 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 KIAA1257Q9ULG3 409 aa12.31□□□□□ -0.44
SNHG3-202ENST00000437681 PIK3CAP42336 1068 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 ERVFC1P60507 584 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 GCNT1Q02742 428 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 PPP3CAQ08209 521 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 NFE2Q16621 373 aaPredicted RBP12.3□□□□□ -0.44
SNHG3-202ENST00000437681 ZNF699Q32M78 642 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 TMEM173Q86WV6 379 aaPredicted RBP12.3□□□□□ -0.44
SNHG3-202ENST00000437681 GPATCH11Q8N954 259 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 ALG13Q9NP73 1137 aaKnown RBP12.3□□□□□ -0.44
SNHG3-202ENST00000437681 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 AFF4Q9UHB7 1163 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms