RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 POLBP06746 335 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 TCF7P36402 384 aaPredicted RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 COG1Q8WTW3 980 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ZDHHC15Q96MV8 337 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 KPNA6O60684 536 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 PFDN1O60925 122 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ASMTLO95671 621 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 AGTP01019 485 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ARL4DP49703 201 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 VCPP55072 806 aaKnown RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 MOXD1Q6UVY6 613 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 DCTN4Q9UJW0 460 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 HDAC4P56524 1084 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 HUNKP57058 714 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 PTK6Q13882 451 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 INPP5AQ14642 412 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 NR1I3Q14994 352 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 MGAT5BQ3V5L5 792 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 DOLKQ9UPQ8 538 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 SPDYE5A6NIY4 337 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 CYP2B6P20813 491 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 FGFR4P22455 802 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 TGFB2P61812 414 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 SPDYE7PQ495Y7 208 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ANO5Q75V66 913 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ECT2Q9H8V3 914 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ARIH2O95376 493 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 HLA-DRAP01903 254 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 PDCLQ13371 301 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 PKN3Q6P5Z2 889 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 FRMD8Q9BZ67 464 aaPredicted RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 DPP3Q9NY33 737 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 PSTPIP1O43586 416 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 EGFRP00533 1210 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 MYL2P10916 166 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 CYP2C8P10632 490 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 RGS7P49802 495 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 TWF1Q12792 350 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 ITPK1Q13572 414 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 DCAF6Q58WW2 860 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 LRRC8EQ6NSJ5 796 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 PRUNE1Q86TP1 453 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 ATP6V0D2Q8N8Y2 350 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 SPATA18Q8TC71 538 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 CDK5RAP1Q96SZ6 601 aaKnown RBP16.6■□□□□ 0.25
PTPN13-204ENST00000436978 FBXL5Q9UKA1 691 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 PKP3Q9Y446 797 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 DPEP1P16444 411 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
PTPN13-204ENST00000436978 OCA2Q04671 838 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 C5orf58C9J3I9 102 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 GLT1D1Q96MS3 346 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 TRABDQ9H4I3 376 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 TSR3Q9UJK0 312 aaKnown RBP16.6■□□□□ 0.25
PTPN13-204ENST00000436978 CEMIPQ8WUJ3 1361 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 IRF1P10914 325 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 NLRP11P59045 1033 aaKnown RBP16.6■□□□□ 0.25
PTPN13-204ENST00000436978 MRPS25P82663 173 aaKnown RBP16.6■□□□□ 0.25
PTPN13-204ENST00000436978 STX19Q8N4C7 294 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 RAB6BQ9NRW1 208 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.6■□□□□ 0.25
PTPN13-204ENST00000436978 NAMPTP43490 491 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 FLOT2Q14254 428 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 ACBD5Q5T8D3 534 aaPredicted RBP16.6■□□□□ 0.25
PTPN13-204ENST00000436978 ATXN7L3BQ96GX2 97 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 CCDC144BQ3MJ40 725 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 SPDYAQ5MJ70 313 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 HIPK4Q8NE63 616 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 TMEM117Q9H0C3 514 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 SLC30A1Q9Y6M5 507 aa16.6■□□□□ 0.25
PTPN13-204ENST00000436978 EFL1Q7Z2Z2 1120 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 TFB1MQ8WVM0 346 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 PABPC5Q96DU9 382 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 NKRFO15226 690 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 APOA4P06727 396 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 UPP2O95045 317 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 KLHL11Q9NVR0 708 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 H2AFYO75367 372 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 TFRCP02786 760 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 GALCP54803 685 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 NLRP14Q86W24 1093 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 EPB41L4AQ9HCS5 686 aaPredicted RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 NEU2Q9Y3R4 380 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 NCAM1P13591 858 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 AMACRQ9UHK6 382 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 RNF103-CHMP3A0A140T963 221 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 FRMD3A2A2Y4 597 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 HNRNPRO43390 633 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 SESN2P58004 480 aaPredicted RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 CATSPER3Q86XQ3 398 aa16.59■□□□□ 0.25
PTPN13-204ENST00000436978 THOC1Q96FV9 657 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 CINPQ9BW66 212 aaPredicted RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
PTPN13-204ENST00000436978 GSPT2Q8IYD1 628 aaKnown RBP16.58■□□□□ 0.25
PTPN13-204ENST00000436978 PGBD3Q8N328 593 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 FOXN1O15353 648 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 ATICP31939 592 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms