RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMPD4-207ENST00000435455 TIGD1Q96MW7 591 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 FNBP1Q96RU3 617 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 MTMR12Q9C0I1 747 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 KCTD10Q9H3F6 313 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 TRIOO75962 3097 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 KPNA7A9QM74 516 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 C2CD4DB7Z1M9 353 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 CYB561D2O14569 222 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 PRRG1O14668 218 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 SP100P23497 879 aaPredicted RBP17.53■□□□□ 0.4
SMPD4-207ENST00000435455 MYBPC2Q14324 1141 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 TCEAL8Q8IYN2 117 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 ZDHHC14Q8IZN3 488 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 GUF1Q8N442 669 aaKnown RBP17.53■□□□□ 0.4
SMPD4-207ENST00000435455 CSGALNACT2Q8N6G5 542 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 FEZF2Q8TBJ5 459 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 CGRRF1Q99675 332 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 C1QTNF1Q9BXJ1 281 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 GTPBP4Q9BZE4 634 aaKnown RBP17.53■□□□□ 0.4
SMPD4-207ENST00000435455 DMAC2Q9NW81 257 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 RMND1Q9NWS8 449 aa17.53■□□□□ 0.4
SMPD4-207ENST00000435455 AFF4Q9UHB7 1163 aaKnown RBP17.53■□□□□ 0.4
SMPD4-207ENST00000435455 MYO10Q9HD67 2058 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 DOCK6Q96HP0 2047 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 CALUO43852 315 aaPredicted RBP17.52■□□□□ 0.4
SMPD4-207ENST00000435455 SMC2O95347 1197 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 KRT19P08727 400 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 DLATP10515 647 aaKnown RBP17.52■□□□□ 0.4
SMPD4-207ENST00000435455 PNOCQ13519 176 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 LMBRD2Q68DH5 695 aaPredicted RBP17.52■□□□□ 0.4
SMPD4-207ENST00000435455 CXorf38Q8TB03 319 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 MFSD14AQ96MC6 490 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 GSDMAQ96QA5 445 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 SIX4Q9UIU6 781 aa17.52■□□□□ 0.4
SMPD4-207ENST00000435455 PTPRJQ12913 1337 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 DOCK8Q8NF50 2099 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 CCL16O15467 120 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 KINO60870 393 aaKnown RBP17.51■□□□□ 0.39
SMPD4-207ENST00000435455 HUS1O60921 280 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 LRG1P02750 347 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 NR3C1P04150 777 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 TNNI1P19237 187 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 BFSP1Q12934 665 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 MYO1EQ12965 1108 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 THEM5Q8N1Q8 247 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 OR5B17Q8NGF7 314 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 BORCS6Q96GS4 357 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 EPHX3Q9H6B9 360 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 CYP4F11Q9HBI6 524 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 GDAP2Q9NXN4 497 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 MUTYHQ9UIF7 546 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 TRAF3IP3Q9Y228 551 aa17.51■□□□□ 0.39
SMPD4-207ENST00000435455 ADCY1Q08828 1119 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 GPR17Q13304 367 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 NFIL3Q16649 462 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 WSCD1Q658N2 575 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 RNF19BQ6ZMZ0 732 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 TRAPPC11Q7Z392 1133 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 GRASPQ7Z6J2 395 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-207ENST00000435455 ELOA2Q8IYF1 753 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-207ENST00000435455 SMARCE1Q969G3 411 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 CCDC127Q96BQ5 260 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 FAM84AQ96KN4 292 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.5■□□□□ 0.393e-8■□□□□ 9.5
SMPD4-207ENST00000435455 POLIQ9UNA4 740 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 FRMD4BQ9Y2L6 1034 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 INSL5Q9Y5Q6 135 aa17.5■□□□□ 0.39
SMPD4-207ENST00000435455 SEC24AO95486 1093 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 GBP2P32456 591 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-207ENST00000435455 AP3M2P53677 418 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 TMEM86AQ8N2M4 240 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 ELMOD1Q8N336 334 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 SPATA20Q8TB22 786 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 SPATA18Q8TC71 538 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 HPDLQ96IR7 371 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 MAPK8IP1Q9UQF2 711 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 PCDHA5Q9Y5H7 936 aa17.49■□□□□ 0.39
SMPD4-207ENST00000435455 MAPK13O15264 365 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
SMPD4-207ENST00000435455 FSHRP23945 695 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 RPL13P26373 211 aaKnown RBP17.48■□□□□ 0.39
SMPD4-207ENST00000435455 SMARCB1Q12824 385 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 PTPN21Q16825 1174 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 COBLL1Q53SF7 1204 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 PARD3BQ8TEW8 1205 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 EDAQ92838 391 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 LIMD1Q9UGP4 676 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 L1RE1Q9UN81 338 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 SNX9Q9Y5X1 595 aa17.48■□□□□ 0.39
SMPD4-207ENST00000435455 ZFP37Q9Y6Q3 630 aaPredicted RBP17.48■□□□□ 0.39
SMPD4-207ENST00000435455 NOTCH4Q99466 2003 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 GPR37L1O60883 481 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 N4BP1O75113 896 aaKnown RBP17.47■□□□□ 0.39
SMPD4-207ENST00000435455 OR4Q2P0C623 313 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 PTPN2P17706 415 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 NR2F2P24468 414 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 CASP4P49662 377 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 UBE2HP62256 183 aa17.47■□□□□ 0.39
SMPD4-207ENST00000435455 PLD1Q13393 1074 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms