RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 CPSF3Q9UKF6 684 aaKnown RBP12.72□□□□□ -0.37
CTCFL-209ENST00000433949 MYO1FO00160 1098 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 GJB1P08034 283 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 CAPN2P17655 700 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 PROZP22891 400 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 GUCY2FP51841 1108 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 ZNF211Q13398 564 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-209ENST00000433949 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-209ENST00000433949 SGSM1Q2NKQ1 1148 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 ZNF484Q5JVG2 852 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 LRIG3Q6UXM1 1119 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 RHPN2Q8IUC4 686 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 OR5B17Q8NGF7 314 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 UNC93B1Q9H1C4 597 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 FZD8Q9H461 694 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 APOBEC3GQ9HC16 384 aaKnown RBP12.72□□□□□ -0.37
CTCFL-209ENST00000433949 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
CTCFL-209ENST00000433949 SCINQ9Y6U3 715 aa12.72□□□□□ -0.37
CTCFL-209ENST00000433949 MAGEB2O15479 319 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 HSPA8P11142 646 aaKnown RBP12.71□□□□□ -0.37
CTCFL-209ENST00000433949 HARSP12081 509 aaKnown RBP12.71□□□□□ -0.37
CTCFL-209ENST00000433949 KCNA10Q16322 511 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 CYP1B1Q16678 543 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 SPOPLQ6IQ16 392 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 MON1BQ7L1V2 547 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 PHF13Q86YI8 300 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-209ENST00000433949 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-209ENST00000433949 FAXDC2Q96IV6 333 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 FAM129AQ9BZQ8 928 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 PARP2Q9UGN5 583 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 Q9Y3F1 56 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.37
CTCFL-209ENST00000433949 COL1A2P08123 1366 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ABLIM1O14639 778 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 DAPK3O43293 454 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 B4GALT4O60513 344 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ACTN2P35609 894 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 CLCN3P51790 818 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 PRMT2P55345 433 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 GJA9P57773 515 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 NOMO3P69849 1222 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ZNF200P98182 395 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 PURAQ00577 322 aaKnown RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 PTP4A2Q12974 167 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 MFSD10Q14728 455 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 TRADDQ15628 312 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 NAA35Q5VZE5 725 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 EFCAB12Q6NXP0 572 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 SLC13A5Q86YT5 568 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 PTPRHQ9HD43 1115 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 CITO14578 2027 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 GOLGA6L10A6NI86 522 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 INO80B-WBP1J3KQ70 363 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 IL18RAPO95256 599 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ASGR1P07306 291 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 PYGMP11217 842 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 TNFSF9P41273 254 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 MARCKSL1P49006 195 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 FNTAP49354 379 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ZNF132P52740 706 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 TRPC3Q13507 836 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ZNF568Q3ZCX4 644 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 DUPD1Q68J44 220 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ZBTB33Q86T24 672 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 C12orf50Q8NA57 414 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 CPA5Q8WXQ8 436 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 MAGOHBQ96A72 148 aaKnown RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 CYFIP2Q96F07 1278 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ANKRD36BP1Q96IX9 119 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 FMO2Q99518 471 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 CELF4Q9BZC1 486 aaKnown RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 INO80BQ9C086 356 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-209ENST00000433949 NIF3L1Q9GZT8 377 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ERVK-5Q9HDB9 667 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 TNFSF13BQ9Y275 285 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 NR2E1Q9Y466 385 aa12.7□□□□□ -0.38
CTCFL-209ENST00000433949 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 ERICH4A6NGS2 130 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 THAP12O43422 761 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 LSM8O95777 96 aaKnown RBP12.69□□□□□ -0.38
CTCFL-209ENST00000433949 F2P00734 622 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 TNNC2P02585 160 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 HOXD8P13378 290 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-209ENST00000433949 RRM1P23921 792 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 PHKA2P46019 1235 aa12.69□□□□□ -0.38
CTCFL-209ENST00000433949 PSEN2P49810 448 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms