RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 C9orf57Q5W0N0 161 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 SYCE2Q6PIF2 218 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 RSPO2Q6UXX9 243 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 TMC5Q6UXY8 1006 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 TMEM184AQ6ZMB5 413 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 HS2ST1Q7LGA3 356 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 PPFIBP1Q86W92 1011 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 EFCAB13Q8IY85 973 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CSGALNACT2Q8N6G5 542 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 KIAA0895Q8NCT3 520 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CACTINQ8WUQ7 758 aaKnown RBP6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CASP10Q92851 521 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 SMARCE1Q969G3 411 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CCDC34Q96HJ3 373 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 MSLNLQ96KJ4 702 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 RPGRIP1Q96KN7 1286 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 FBXL18Q96ME1 805 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 S1PR5Q9H228 398 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 ASB7Q9H672 318 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 RXFP1Q9HBX9 757 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 AGPAT3Q9NRZ7 376 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 STK39Q9UEW8 545 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 CDY1Q9Y6F8 540 aa6.24□□□□□ -1.41
HMGB3P24-201ENST00000433260 SCN1AP35498 2009 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 TMEM189-UBE2V1I3L0A0 370 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 BIN1O00499 593 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CYB561D2O14569 222 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CALUO43852 315 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 KINO60870 393 aaKnown RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 RFPL2O75678 378 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 RHOBTB3O94955 611 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CLSTN1O94985 981 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 IL18RAPO95256 599 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 SMC2O95347 1197 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 F12P00748 615 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CST3P01034 146 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 ITGB3P05106 788 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 OR4Q2P0C623 313 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 TMEM191BP0C7N4 346 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 DLATP10515 647 aaKnown RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 LRPAP1P30533 357 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CASP4P49662 377 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 LILRA4P59901 499 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 COL19A1Q14993 1142 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 SNRNP35Q16560 246 aaKnown RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 BMT2Q1RMZ1 405 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CTXN3Q4LDR2 81 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 ATAT1Q5SQI0 421 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CEP135Q66GS9 1140 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CES5AQ6NT32 575 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 USP37Q86T82 979 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 BRSK2Q8IWQ3 736 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 XXYLT1Q8NBI6 393 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 KREMEN2Q8NCW0 462 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 OR5B17Q8NGF7 314 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 PIK3R5Q8WYR1 880 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 ELMO3Q96BJ8 720 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 EEF2KMTQ96G04 330 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 SUSD3Q96L08 255 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 SENP8Q96LD8 212 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 TIGD1Q96MW7 591 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 FNBP1Q96RU3 617 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 UHRF1Q96T88 793 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 KCTD10Q9H3F6 313 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 PIDD1Q9HB75 910 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 KIAA1586Q9HCI6 787 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 CD320Q9NPF0 282 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 MAN1C1Q9NR34 630 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 FNIP2Q9P278 1114 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 FKBPLQ9UIM3 349 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 HOOK1Q9UJC3 728 aaKnown RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 POLIQ9UNA4 740 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 DERAQ9Y315 318 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 FCF1Q9Y324 198 aaKnown RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 R3HCC1Q9Y3T6 440 aaKnown RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 USP15Q9Y4E8 981 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 PTPRJQ12913 1337 aa6.23□□□□□ -1.41
HMGB3P24-201ENST00000433260 C2orf16Q68DN1 1984 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 ANO9A1A5B4 782 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 KPNA7A9QM74 516 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 H7C4K7 107 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 M0QZQ0 153 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 PDXKO00764 312 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 KIAA0391O15091 583 aaKnown RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 PHACTR2O75167 634 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 KIF20AO95235 890 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 GLUD1P00367 558 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 TNNC2P02585 160 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 NR3C1P04150 777 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 CPB1P15086 417 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 HOXB8P17481 243 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 POLR2BP30876 1174 aaKnown RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 PRCPP42785 496 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 TAF6P49848 677 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 UBE2HP62256 183 aa6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 SNRPFP62306 86 aaKnown RBP6.22□□□□□ -1.41
HMGB3P24-201ENST00000433260 DLG4P78352 724 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms