RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 PCDHB8Q9UN66 801 aa16.27■□□□□ 0.2
CDRT15-202ENST00000431716 PLXNA4Q9HCM2 1894 aa16.27■□□□□ 0.19
CDRT15-202ENST00000431716 GOLGA6L19H0YKK7 550 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 I3L4J1 428 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 CYB561D2O14569 222 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 ASS1P00966 412 aaKnown RBP16.26■□□□□ 0.19
CDRT15-202ENST00000431716 URODP06132 367 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 ODC1P11926 461 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 P4HA1P13674 534 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 TYMPP19971 482 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 DNAJB1P25685 340 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 GLUD2P49448 558 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 MYL7Q01449 175 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 DSG1Q02413 1049 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 CAMK1Q14012 370 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 VWA3BQ502W6 1294 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 WDR44Q5JSH3 913 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 KIAA0319Q5VV43 1072 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 SCARA3Q6AZY7 606 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 TAS1R1Q7RTX1 841 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 LUZP1Q86V48 1076 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 TCF25Q9BQ70 676 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 ZBP1Q9H171 429 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 HSD3B7Q9H2F3 369 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 NDST4Q9H3R1 872 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 UBE2ZQ9H832 354 aaPredicted RBP16.26■□□□□ 0.19
CDRT15-202ENST00000431716 ENTPD7Q9NQZ7 604 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 MRPL17Q9NRX2 175 aaKnown RBP16.26■□□□□ 0.19
CDRT15-202ENST00000431716 LIMA1Q9UHB6 759 aaKnown RBP16.26■□□□□ 0.19
CDRT15-202ENST00000431716 IRAK3Q9Y616 596 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 TRANK1O15050 2925 aa16.26■□□□□ 0.19
CDRT15-202ENST00000431716 GTPBP10A4D1E9 387 aaKnown RBP16.25■□□□□ 0.19
CDRT15-202ENST00000431716 FSCN2O14926 492 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 HUS1O60921 280 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 CXCL14O95715 111 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 KCNA5P22460 613 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 ERVFC1P60507 584 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 TNNC1P63316 161 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 CREMQ03060 361 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
CDRT15-202ENST00000431716 KRT31Q15323 416 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 WDR72Q3MJ13 1102 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 ZNF667Q5HYK9 610 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 ANKS3Q6ZW76 656 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 METTL23Q86XA0 190 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 CEP57Q86XR8 500 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 TOP6BLQ8N6T0 577 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 MRPL43Q8N983 215 aaKnown RBP16.25■□□□□ 0.19
CDRT15-202ENST00000431716 SPATA18Q8TC71 538 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 FAXDC2Q96IV6 333 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDRT15-202ENST00000431716 CLDND1Q9NY35 253 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 SNX9Q9Y5X1 595 aa16.25■□□□□ 0.19
CDRT15-202ENST00000431716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.24■□□□□ 0.19
CDRT15-202ENST00000431716 H7C4K7 107 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 CLSTN1O94985 981 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 OAZ2O95190 189 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 CYP11A1P05108 521 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 TKTP29401 623 aaKnown RBP16.24■□□□□ 0.19
CDRT15-202ENST00000431716 IRS1P35568 1242 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 KCNQ1P51787 676 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 MIIPQ5JXC2 388 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 RTP2Q5QGT7 225 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 TMEM86AQ8N2M4 240 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 RIN2Q8WYP3 895 aaPredicted RBP16.24■□□□□ 0.19
CDRT15-202ENST00000431716 PIK3R5Q8WYR1 880 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 SEMA4DQ92854 862 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
CDRT15-202ENST00000431716 OXCT2Q9BYC2 517 aaPredicted RBP16.24■□□□□ 0.19
CDRT15-202ENST00000431716 TLE6Q9H808 572 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 TAB2Q9NYJ8 693 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
CDRT15-202ENST00000431716 PRRC2BQ5JSZ5 2229 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 PES1O00541 588 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 LILRB3O75022 631 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 ATP1A3P13637 1013 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 COPB1P53618 953 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 NOP14P78316 857 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 YWHAHQ04917 246 aaPredicted RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 HYAL1Q12794 435 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 MRPL58Q14197 206 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 GBP6Q6ZN66 633 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 LIMS2Q7Z4I7 341 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 RBM23Q86U06 439 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 LNX1Q8TBB1 728 aaPredicted RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 B3GALT6Q96L58 329 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 MMS19Q96T76 1030 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 PI4K2AQ9BTU6 479 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 EMILIN2Q9BXX0 1053 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 VPS16Q9H269 839 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 RXFP1Q9HBX9 757 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 FNIP2Q9P278 1114 aa16.23■□□□□ 0.19
CDRT15-202ENST00000431716 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
CDRT15-202ENST00000431716 BACE2Q9Y5Z0 518 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms