RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 PLCB4Q15147 1175 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 GPAT2Q6NUI2 795 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 MFSD7Q6UXD7 560 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 ARFGAP2Q8N6H7 521 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 ATXN2LQ8WWM7 1075 aaKnown RBP13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 XYLT2Q9H1B5 865 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 NRBP2Q9NSY0 501 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 SAE1Q9UBE0 346 aaPredicted RBP13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 NXF1Q9UBU9 619 aaKnown RBP13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 RGS16O15492 202 aaPredicted RBP13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 TOM1L1O75674 476 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 CXCL8P10145 99 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 RFC5P40937 340 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 MMP13P45452 471 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 IFNAR2P48551 515 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 EIF3BP55884 814 aaKnown RBP13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 IGBP1P78318 339 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 LRRC14Q15048 493 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 CYP4X1Q8N118 509 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 FEZF2Q8TBJ5 459 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 PPP1R13LQ8WUF5 828 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 RNPEPQ9H4A4 650 aa13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
TNFSF13B-202ENST00000430559 INO80B-WBP1J3KQ70 363 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 LDHAP00338 332 aaKnown RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 MYBL1P10243 752 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 ASPAP45381 313 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 BPIFB4P59827 614 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 ENPEPQ07075 957 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 PTK6Q13882 451 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 NEDD9Q14511 834 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 CLUL1Q15846 466 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 CDCA2Q69YH5 1023 aaPredicted RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 C6orf89Q6UWU4 347 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 SLCO2A1Q92959 643 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 PGM2Q96G03 612 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 XPO6Q96QU8 1125 aaKnown RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 TWNKQ96RR1 684 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 MRPL4Q9BYD3 311 aaKnown RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 INO80BQ9C086 356 aaPredicted RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 SDCBP2Q9H190 292 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 DNPEPQ9ULA0 475 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 CSADQ9Y600 493 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 RASGRF2O14827 1237 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 PAEPP09466 180 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 DRD4P21917 467 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 ADCY8P40145 1251 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 SLC1A1P43005 524 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 MOGSQ13724 837 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 SMTNL2Q2TAL5 461 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 ERMARDQ5T6L9 678 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 DENND1BQ6P3S1 775 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 EXOC3L1Q86VI1 746 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 HOOK3Q86VS8 718 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 RHOT1Q8IXI2 618 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 KIAA0319LQ8IZA0 1049 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 MGARPQ8TDB4 240 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 KCNN1Q92952 543 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 SPATA33Q96N06 139 aa13.23□□□□□ -0.29
TNFSF13B-202ENST00000430559 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 OGTO15294 1046 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 TMEM191BP0C7N4 346 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 MTM1Q13496 603 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 TNFAIP8L3Q5GJ75 292 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 SPDYCQ5MJ68 293 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 CELF3Q5SZQ8 465 aaKnown RBP13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 ZFYVE27Q5T4F4 411 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 LIN9Q5TKA1 542 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 FAM160B1Q5W0V3 765 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 ZPBP2Q6X784 338 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 WDR49Q8IV35 697 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 ARFGAP1Q8N6T3 406 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 JOSD2Q8TAC2 188 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 SNF8Q96H20 258 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 PRMT1Q99873 361 aaKnown RBP13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 CXCL16Q9H2A7 254 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 WHRNQ9P202 907 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 TBK1Q9UHD2 729 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 SIX4Q9UIU6 781 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 A0A087WUV0 522 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 IGKV6-21A0A0C4DH24 114 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 GOLGA8SH3BPF8 625 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 GPR25O00155 361 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 NOP56O00567 594 aaKnown RBP13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 NFICP08651 508 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 TBXAS1P24557 533 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 GAD2Q05329 585 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 MCL1Q07820 350 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 MPP2Q14168 576 aa13.22□□□□□ -0.29
TNFSF13B-202ENST00000430559 FASTKD3Q14CZ7 662 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms