RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 SLC17A7Q9P2U7 560 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 PTPRJQ12913 1337 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 MAPK13O15264 365 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 GSTA1P08263 222 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 CCND1P24385 295 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 GBP1P32455 592 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDH3-202ENST00000429102 BIRC2Q13490 618 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 CROCCP2Q86T23 111 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 FMNL3Q8IVF7 1028 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 DDX1Q92499 740 aaKnown RBP13.18□□□□□ -0.3
CDH3-202ENST00000429102 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 RIPK3Q9Y572 518 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 GRIN3BO60391 1043 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 AVILO75366 819 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 UNC5CO95185 931 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 BAG2O95816 211 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 SRGAP2CP0DJJ0 459 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 FGFR1P11362 822 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 GM2AP17900 193 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 TFAMQ00059 246 aaKnown RBP13.18□□□□□ -0.3
CDH3-202ENST00000429102 MTFR1Q15390 333 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 ANKRD22Q5VYY1 191 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 PPP1R21Q6ZMI0 780 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 NETO2Q8NC67 525 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
CDH3-202ENST00000429102 MCUR1Q96AQ8 359 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
CDH3-202ENST00000429102 ZNF395Q9H8N7 513 aaPredicted RBP13.18□□□□□ -0.3
CDH3-202ENST00000429102 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
CDH3-202ENST00000429102 DHX15O43143 795 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 POLGP54098 1239 aaPredicted RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 PSMC5P62195 406 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 MXRA7P84157 204 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 CLUL1Q15846 466 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 TLDC1Q6P9B6 456 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 TTC7BQ86TV6 843 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 GPD1LQ8N335 351 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 CFAP57Q96MR6 1250 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 DDX50Q9BQ39 737 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 PIH1D1Q9NWS0 290 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 IKBKGQ9Y6K9 419 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 ZNF862O60290 1169 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 FAM155BO75949 473 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 PROSCO94903 275 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 MAMLD1Q13495 774 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 BSPRYQ5W0U4 402 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 NLRP9Q7RTR0 991 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 SLC25A41Q8N5S1 370 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 FAM13CQ8NE31 585 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 CNKSR1Q969H4 720 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 CFAP36Q96G28 342 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 APOBEC3GQ9HC16 384 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 RBAKQ9NYW8 714 aaPredicted RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 HEY2Q9UBP5 337 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 APBA3O96018 575 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 GDF10P55107 478 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 GTF2BQ00403 316 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 PTK6Q13882 451 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 CRYMQ14894 314 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 MAPK6Q16659 721 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 DNAJC24Q6P3W2 148 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 FAM71DQ8N9W8 422 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 TCP10LQ8TDR4 215 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 RSAD2Q8WXG1 361 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 NAF1Q96HR8 494 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 RIT2Q99578 217 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
CDH3-202ENST00000429102 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 PCDHB2Q9Y5E7 798 aa13.17□□□□□ -0.3
CDH3-202ENST00000429102 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
CDH3-202ENST00000429102 TCRBV7S3A2A0A539 114 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 CD48P09326 243 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 OTOAQ7RTW8 1153 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 FAM111AQ96PZ2 611 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 MSTO1Q9BUK6 570 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 TXLNGQ9NUQ3 528 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
CDH3-202ENST00000429102 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 WDR64B1ANS9 1081 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 ATP2A1O14983 1001 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 CST8O60676 142 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 CST3P01034 146 aaPredicted RBP13.16□□□□□ -0.3
CDH3-202ENST00000429102 CAP2P40123 477 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 RAP1GAPP47736 663 aa13.16□□□□□ -0.3
CDH3-202ENST00000429102 KDSRQ06136 332 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms