RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 PEX5P50542 639 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 ATXN1P54253 815 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 LACTBP83111 547 aaPredicted RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 MMRN1Q13201 1228 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 MAPK6Q16659 721 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 FER1L6Q2WGJ9 1857 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 PAN2Q504Q3 1202 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 TMC3Q7Z5M5 1100 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 CEP57Q86XR8 500 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 RASGEF1CQ8N431 466 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 WHAMMQ8TF30 809 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 HVCN1Q96D96 273 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 SH3GL2Q99962 352 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 KIF9Q9HAQ2 790 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 DIS3Q9Y2L1 958 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 WDR91A4D1P6 747 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 MAFGO15525 162 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 DYNC1LI2O43237 492 aaPredicted RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 KIAA0754O94854 1291 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 LSP1P33241 339 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 RFC1P35251 1148 aaPredicted RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 ERFP50548 548 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 RWDD2BP57060 319 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 E2F5Q15329 346 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 CLEC16AQ2KHT3 1053 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 C15orf59Q2T9L4 293 aaPredicted RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 ZNF699Q32M78 642 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 ZACNQ401N2 412 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 MFSD7Q6UXD7 560 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 NPNTQ6UXI9 565 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 SPNS2Q8IVW8 549 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 MREGQ8N565 214 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 KHSRPQ92945 711 aaKnown RBP eCLIP8.88□□□□□ -0.99
CD44-208ENST00000428726 MFSD14AQ96MC6 490 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 CALN1Q9BXU9 219 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 B3GNT5Q9BYG0 378 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 CEP41Q9BYV8 373 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 IMPG2Q9BZV3 1241 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 NRBP2Q9NSY0 501 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 CYTH4Q9UIA0 394 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 MYH9P35579 1960 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 PRRC2BQ5JSZ5 2229 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 COL11A1P12107 1806 aaPredicted RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 CITO14578 2027 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 KIAA0391O15091 583 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 RPS6KA5O75582 802 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 NPTXRO95502 500 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 GH1P01241 217 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 ADORA2AP29274 412 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 EPHX2P34913 555 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 RHOT2Q8IXI1 618 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 HEXIM2Q96MH2 286 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 GPR20Q99678 358 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 DHX33Q9H6R0 707 aaKnown RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 ZNF112Q9UJU3 913 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 DNPEPQ9ULA0 475 aa8.88□□□□□ -0.99
CD44-208ENST00000428726 MAFBQ9Y5Q3 323 aaPredicted RBP8.88□□□□□ -0.99
CD44-208ENST00000428726 SZT2Q5T011 3432 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 E2F8A0AVK6 867 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 SOCS7O14512 581 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 ADCY6O43306 1168 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 DKC1O60832 514 aaKnown RBP eCLIP8.87□□□□□ -0.99
CD44-208ENST00000428726 CNMDO75829 334 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 CTNNA2P26232 953 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 HNRNPH1P31943 449 aaKnown RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 COILP38432 576 aaPredicted RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 IREB2P48200 963 aaKnown RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 GPC3P51654 580 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 ITGA8P53708 1063 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 PMS2P54278 862 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 MCCD1P59942 119 aaPredicted RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 IFRD2Q12894 506 aaPredicted RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 CUL1Q13616 776 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 DENND2CQ68D51 928 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 JADE1Q6IE81 842 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 ZDHHC24Q6UX98 284 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 ARMCX2Q7L311 632 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 C18orf25Q96B23 403 aaPredicted RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 ATP6V1G3Q96LB4 118 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 FGD4Q96M96 766 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 OSMRQ99650 979 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 SENP7Q9BQF6 1050 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 C17orf75Q9HAS0 396 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 PDLIM7Q9NR12 457 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 AGAP1Q9UPQ3 857 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 TIMM13Q9Y5L4 95 aaPredicted RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 A0A0B4J269 797 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 LACTBL1A8MY62 500 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 ADCY3O60266 1144 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 KRT1P04264 644 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 CTSHP09668 335 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 POLR2BP30876 1174 aaKnown RBP8.87□□□□□ -0.99
CD44-208ENST00000428726 OAZ1P54368 228 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 MAMLD1Q13495 774 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 ZNF618Q5T7W0 954 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 ATF7IP2Q5U623 682 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 KCNV1Q6PIU1 500 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 SGIP1Q9BQI5 828 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 SDCBP2Q9H190 292 aa8.87□□□□□ -0.99
CD44-208ENST00000428726 SLITRK6Q9H5Y7 841 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms