RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TRPV4Q9HBA0 871 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 UBQLN1Q9UMX0 589 aaKnown RBP17.99■□□□□ 0.47
VARS-216ENST00000428445 SPTBN2O15020 2390 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 SCN1AP35498 2009 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 DCDC2BA2VCK2 349 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 MTMR11A4FU01 709 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 TISP43B9A030 160 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 AARSP49588 968 aaKnown RBP eCLIP17.98■□□□□ 0.47
VARS-216ENST00000428445 LIG4P49917 911 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 GRIN1Q05586 938 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 PPP2R3AQ06190 1150 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 SPEM2Q0P670 501 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 GPR17Q13304 367 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 OVOS1Q6IE37 1185 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 JADE1Q6IE81 842 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 CENPPQ6IPU0 288 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 SLC39A4Q6P5W5 647 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 TXNDC11Q6PKC3 985 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 GAREM2Q75VX8 874 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 DNAJB7Q7Z6W7 309 aaPredicted RBP17.98■□□□□ 0.47
VARS-216ENST00000428445 ARID3BQ8IVW6 561 aaPredicted RBP17.98■□□□□ 0.47
VARS-216ENST00000428445 MYCT1Q8N699 235 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 DEPDC1BQ8WUY9 529 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 SENP8Q96LD8 212 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 LPIN3Q9BQK8 851 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 MKNK1Q9BUB5 465 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 IKZF4Q9H2S9 585 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 RPF1Q9H9Y2 349 aaKnown RBP17.98■□□□□ 0.47
VARS-216ENST00000428445 TRPV5Q9NQA5 729 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 TBX20Q9UMR3 447 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 KIF3AQ9Y496 699 aa17.98■□□□□ 0.47
VARS-216ENST00000428445 CHURC1-FNTBB4DL54 471 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 ANKRD63C9JTQ0 380 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 NFICP08651 508 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 FNTBP49356 437 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 KPNA1P52294 538 aaPredicted RBP17.97■□□□□ 0.47
VARS-216ENST00000428445 EPHB3P54753 998 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 LILRA4P59901 499 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 MCM6Q14566 821 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 RILPL1Q5EBL4 403 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 PRR23BQ6ZRT6 265 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 Q6ZS52 159 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 GPBP1Q86WP2 473 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 YAF2Q8IY57 180 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 OR10T2Q8NGX3 314 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 CSGALNACT1Q8TDX6 532 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 ATXN3LQ9H3M9 355 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 ZHX3Q9H4I2 956 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 GTSE1Q9NYZ3 720 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 MAFFQ9ULX9 164 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 ATG2BQ96BY7 2078 aa17.97■□□□□ 0.47
VARS-216ENST00000428445 K7ENM7 598 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 HNRNPDLO14979 420 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 OGTO15294 1046 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 HRO43593 1189 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 CD2BP2O95400 341 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 CYP3A5P20815 502 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 GABRR2P28476 465 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 GJB2P29033 226 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 NMT1P30419 496 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 ALDH1A3P47895 512 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 CXCL12P48061 93 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 ACOT2P49753 483 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 CYP4F8P98187 520 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 C8orf34Q49A92 452 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 GPR158Q5T848 1215 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 SPATA1Q5VX52 437 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 HEATR6Q6AI08 1181 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 LEMD2Q8NC56 503 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 SECISBP2LQ93073 1101 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 SMG9Q9H0W8 520 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 BLOC1S4Q9NUP1 217 aa17.96■□□□□ 0.47
VARS-216ENST00000428445 LARSQ9P2J5 1176 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.96■□□□□ 0.47
VARS-216ENST00000428445 RALGAPA1Q6GYQ0 2036 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 OR6C75A6NL08 312 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 CCR3P51677 355 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 TNK2Q07912 1038 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 SLC39A12Q504Y0 691 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 ZC2HC1CQ53FD0 456 aaPredicted RBP17.95■□□□□ 0.46
VARS-216ENST00000428445 C9orf57Q5W0N0 161 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 GIPC2Q8TF65 315 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 BORCS6Q96GS4 357 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 CNTNAP3BQ96NU0 1288 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 MSTO1Q9BUK6 570 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 CNTNAP3Q9BZ76 1288 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 GPR88Q9GZN0 384 aa17.95■□□□□ 0.46
VARS-216ENST00000428445 CPSF3Q9UKF6 684 aaKnown RBP17.95■□□□□ 0.46
VARS-216ENST00000428445 SDK1Q7Z5N4 2213 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 TSC2P49815 1807 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 A0A0B4J269 797 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 SPECC1L-ADORA2AF8WAN1 911 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 H3BQV1 296 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
VARS-216ENST00000428445 CHADO15335 359 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 FAM13AO94988 1023 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 PRAMEF12O95522 483 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 ADRB2P07550 413 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 TYMPP19971 482 aa17.94■□□□□ 0.46
VARS-216ENST00000428445 FCHO2Q0JRZ9 810 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms