RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 MYO1EQ12965 1108 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 HSP90AA4PQ58FG1 418 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 C1orf220Q5T0J3 134 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 OVOS1Q6IE37 1185 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 SV2AQ7L0J3 742 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
SMIM12-203ENST00000426886 FBXL5Q9UKA1 691 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 COG5Q9UP83 839 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.49□□□□□ -0.25
SMIM12-203ENST00000426886 BICDL2A1A5D9 508 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 ESPNB1AK53 854 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 C4BPAP04003 597 aaKnown RBP13.48□□□□□ -0.25
SMIM12-203ENST00000426886 ODC1P11926 461 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 NLRP12P59046 1061 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 KCNC3Q14003 757 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 WDR72Q3MJ13 1102 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 CCDC40Q4G0X9 1142 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 CCDC183Q5T5S1 534 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 TMC5Q6UXY8 1006 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 MLKLQ8NB16 471 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 MED15Q96RN5 788 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 TMEM209Q96SK2 561 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 MAN1C1Q9NR34 630 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 MTRRQ9UBK8 725 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 HUS1O60921 280 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 LRRN2O75325 713 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 RFPL2O75678 378 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 PNPLA4P41247 253 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 SLC22A17Q8WUG5 538 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 PGLYRP2Q96PD5 576 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 PI4K2AQ9BTU6 479 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 FNIP2Q9P278 1114 aa13.48□□□□□ -0.25
SMIM12-203ENST00000426886 ARMCX3Q9UH62 379 aaPredicted RBP13.48□□□□□ -0.25
SMIM12-203ENST00000426886 HCRTO43612 131 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 CPB1P15086 417 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 NCOA4Q13772 614 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 TPD52L1Q16890 204 aaPredicted RBP13.47□□□□□ -0.25
SMIM12-203ENST00000426886 RARS2Q5T160 578 aaKnown RBP13.47□□□□□ -0.25
SMIM12-203ENST00000426886 ZNF280DQ6N043 979 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 PPFIBP1Q86W92 1011 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.47□□□□□ -0.25
SMIM12-203ENST00000426886 L1RE1Q9UN81 338 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 PDCD11Q14690 1871 aaKnown RBP13.47□□□□□ -0.25
SMIM12-203ENST00000426886 H7C4K7 107 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 VNN1O95497 513 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 CLDN10P78369 228 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 ROR1Q01973 937 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 MRPL58Q14197 206 aaKnown RBP13.47□□□□□ -0.25
SMIM12-203ENST00000426886 SPOPLQ6IQ16 392 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 ANKRD54Q6NXT1 300 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 PDXDC1Q6P996 788 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 SYCE2Q6PIF2 218 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 CASP10Q92851 521 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 MKNK1Q9BUB5 465 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 VWA8A3KMH1 1905 aa13.47□□□□□ -0.25
SMIM12-203ENST00000426886 IKBKBO14920 756 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 MAPK13O15264 365 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 SRGAP2BP0DMP2 458 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 ACAT1P24752 427 aaKnown RBP13.46□□□□□ -0.25
SMIM12-203ENST00000426886 PIK3CAP42336 1068 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 MRPS5P82675 430 aaKnown RBP13.46□□□□□ -0.25
SMIM12-203ENST00000426886 COL19A1Q14993 1142 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 SCARA5Q6ZMJ2 495 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 PDCL2Q8N4E4 241 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 TAS1R2Q8TE23 839 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 POLIQ9UNA4 740 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 BACE2Q9Y5Z0 518 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 WDR27A2RRH5 827 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 OAZ2O95190 189 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.25
SMIM12-203ENST00000426886 MRE11P49959 708 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 CREMQ03060 361 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 SOWAHAQ2M3V2 549 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 ZACNQ401N2 412 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 PTCRAQ6ISU1 281 aaPredicted RBP13.46□□□□□ -0.25
SMIM12-203ENST00000426886 FILIP1Q7Z7B0 1213 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 OR10T2Q8NGX3 314 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 MSLNLQ96KJ4 702 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 CD207Q9UJ71 328 aa13.46□□□□□ -0.25
SMIM12-203ENST00000426886 SLC16A3O15427 465 aaKnown RBP13.45□□□□□ -0.26
SMIM12-203ENST00000426886 HLA-DRAP01903 254 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 PDGFRBP09619 1106 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 IL9P15248 144 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 TYMPP19971 482 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 AP3M2P53677 418 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 ADCY1Q08828 1119 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 RAB33AQ14088 237 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 ZNF699Q32M78 642 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 CBWD6Q4V339 395 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 SLC8B1Q6J4K2 584 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 LILRA6Q6PI73 481 aa13.45□□□□□ -0.26
SMIM12-203ENST00000426886 RNF19BQ6ZMZ0 732 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms