RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SH2D4BQ5SQS7 431 aa14.58□□□□□ -0.07
RPL28-202ENST00000426763 IL31Q6EBC2 164 aa14.58□□□□□ -0.07
RPL28-202ENST00000426763 DPF3Q92784 378 aa14.58□□□□□ -0.07
RPL28-202ENST00000426763 WNK4Q96J92 1243 aa14.58□□□□□ -0.07
RPL28-202ENST00000426763 MUC3BQ9H195 1237 aa14.58□□□□□ -0.07
RPL28-202ENST00000426763 CYP3A43Q9HB55 503 aa14.58□□□□□ -0.07
RPL28-202ENST00000426763 MRFAP1Q9Y605 127 aa14.58□□□□□ -0.07
RPL28-202ENST00000426763 EGFRP00533 1210 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 LGALS2P05162 132 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 PCK1P35558 622 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 LHX1P48742 406 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 CCZ1BP86790 482 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 CCZ1P86791 482 aaPredicted RBP14.58□□□□□ -0.08
RPL28-202ENST00000426763 SP3Q02447 781 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 NSUN2Q08J23 767 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPL28-202ENST00000426763 SLC12A1Q13621 1099 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 SPATA4Q8NEY3 305 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 VPS11Q9H270 941 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 RASA4BC9J798 803 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 RASA4O43374 803 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 SLC2A3P11169 496 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 P3H1Q32P28 736 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 SLC27A1Q6PCB7 646 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 TTC23LQ6PF05 361 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 DEFB128Q7Z7B8 93 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 CHSY1Q86X52 802 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 RNF208Q9H0X6 261 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 GTF3C4Q9UKN8 822 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 ITGA11Q9UKX5 1188 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 KPNA7A9QM74 516 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 RAG1P15918 1043 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 CDR2Q01850 454 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 RCN2Q14257 317 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 CTXN3Q4LDR2 81 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 CELF3Q5SZQ8 465 aaKnown RBP14.58□□□□□ -0.08
RPL28-202ENST00000426763 MOB2Q70IA6 237 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 TAS2R42Q7RTR8 314 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 ACOT1Q86TX2 421 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 PPP1R2P1Q96PQ5 205 aa14.58□□□□□ -0.08
RPL28-202ENST00000426763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPL28-202ENST00000426763 ADCY3O60266 1144 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 SPARCL1Q14515 664 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 DBN1Q16643 649 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 PTGISQ16647 500 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 CYP4A22Q5TCH4 519 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 BTNL9Q6UXG8 535 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 RASSF4Q9H2L5 321 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 TRPV2Q9Y5S1 764 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 LMO7Q8WWI1 1683 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 PHF2O75151 1096 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 HSPA4LO95757 839 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 CXCL8P10145 99 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 COMTP21964 271 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 RPL10AP62906 217 aaKnown RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 ZPBP2Q6X784 338 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 PPHLN1Q8NEY8 458 aaKnown RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 ZNF507Q8TCN5 953 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ENTPD7Q9NQZ7 604 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 ROBO1Q9Y6N7 1651 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 FOXN3O00409 490 aaPredicted RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 PDK1Q15118 436 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 RAD9BQ6WBX8 426 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ATP6V0D2Q8N8Y2 350 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 TMEM39AQ9NV64 488 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 AMACRQ9UHK6 382 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 ZNF280DQ6N043 979 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 GPR142Q7Z601 462 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 NLGN2Q8NFZ4 835 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 TRAPPC12Q8WVT3 735 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ARHGEF26Q96DR7 871 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 PABPC5Q96DU9 382 aaKnown RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 SARS2Q9NP81 518 aaKnown RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 SNTG2Q9NY99 539 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ESYT3A0FGR9 886 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ACKR2O00590 384 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 CTIFO43310 598 aaKnown RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 PLA2G6O60733 806 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 ACO1P21399 889 aaKnown RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 HIF1AQ16665 826 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.57□□□□□ -0.082e-9■□□□□ 9.3
RPL28-202ENST00000426763 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
RPL28-202ENST00000426763 WDR24Q96S15 920 aa14.57□□□□□ -0.08
RPL28-202ENST00000426763 SMIM22K7EJ46 135 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 EML1O00423 815 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 ATP9BO43861 1147 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 CSDE1O75534 798 aaKnown RBP14.56□□□□□ -0.08
RPL28-202ENST00000426763 AKAP3O75969 853 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 ALDH2P05091 517 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 YWHAHQ04917 246 aaPredicted RBP14.56□□□□□ -0.08
RPL28-202ENST00000426763 ST3GAL1Q11201 340 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 TMEM132BQ14DG7 1078 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 LMNTD2Q8IXW0 634 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 CFAP61Q8NHU2 1237 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 TTC17Q96AE7 1141 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 LRGUKQ96M69 825 aa14.56□□□□□ -0.08
RPL28-202ENST00000426763 GHRP10912 638 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms