RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 EHBP1Q8NDI1 1231 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 NT5C1BQ96P26 610 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 ALG13Q9NP73 1137 aaKnown RBP25.85■■□□□ 1.73
APOE-202ENST00000425718 CHST7Q9NS84 486 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 GCNT4Q9P109 453 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 DAAM1Q9Y4D1 1078 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 IRAK3Q9Y616 596 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 TSC2P49815 1807 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 LHX1P48742 406 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 YWHAHQ04917 246 aaPredicted RBP25.84■■□□□ 1.73
APOE-202ENST00000425718 PIK3R5Q8WYR1 880 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 LRCH3Q96II8 777 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 FAM84AQ96KN4 292 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 MMS19Q96T76 1030 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 NIF3L1Q9GZT8 377 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 CYP3A43Q9HB55 503 aa25.84■■□□□ 1.73
APOE-202ENST00000425718 F8W810 466 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 SPTLC1O15269 473 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 GRM6O15303 877 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 TACC1O75410 805 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 ATP1A3P13637 1013 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 ZNF280DQ6N043 979 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 CEP57Q86XR8 500 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 THEM5Q8N1Q8 247 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 RNF214Q8ND24 703 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 MRPL38Q96DV4 380 aaKnown RBP25.83■■□□□ 1.73
APOE-202ENST00000425718 GAS2L1Q99501 681 aaPredicted RBP25.83■■□□□ 1.73
APOE-202ENST00000425718 TCF25Q9BQ70 676 aa25.83■■□□□ 1.73
APOE-202ENST00000425718 NXF1Q9UBU9 619 aaKnown RBP25.83■■□□□ 1.73
APOE-202ENST00000425718 CBFA2T2O43439 604 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 RFX1P22670 979 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 OVOS1Q6IE37 1185 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 ENOSF1Q7L5Y1 443 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 SPRED2Q7Z698 418 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 MICAL1Q8TDZ2 1067 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 GDPD5Q8WTR4 605 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 EMILIN2Q9BXX0 1053 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 INTS2Q9H0H0 1204 aaKnown RBP25.82■■□□□ 1.72
APOE-202ENST00000425718 TTYH1Q9H313 450 aaPredicted RBP25.82■■□□□ 1.72
APOE-202ENST00000425718 FNIP2Q9P278 1114 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 MYO7AQ13402 2215 aa25.82■■□□□ 1.72
APOE-202ENST00000425718 FSCN2O14926 492 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 OAZ2O95190 189 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 TKTP29401 623 aaKnown RBP25.81■■□□□ 1.72
APOE-202ENST00000425718 FANCCQ00597 558 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 UBXN1Q04323 297 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 ADGRF2Q8IZF7 708 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 RIN2Q8WYP3 895 aaPredicted RBP25.81■■□□□ 1.72
APOE-202ENST00000425718 SEMA4DQ92854 862 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 VN1R3Q9BXE9 311 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 BACE2Q9Y5Z0 518 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 CHD9Q3L8U1 2897 aa25.81■■□□□ 1.72
APOE-202ENST00000425718 OR6C75A6NL08 312 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 I3L4J1 428 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 CXCL14O95715 111 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 C1RP00736 705 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 POU3F3P20264 500 aaPredicted RBP25.8■■□□□ 1.72
APOE-202ENST00000425718 PCSK1P29120 753 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 UBASH3AP57075 661 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 PSMD5Q16401 504 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 UVSSAQ2YD98 709 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 VARS2Q5ST30 1063 aaKnown RBP25.8■■□□□ 1.72
APOE-202ENST00000425718 KIAA0319Q5VV43 1072 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 TRIM65Q6PJ69 517 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 APTXQ7Z2E3 356 aaKnown RBP25.8■■□□□ 1.72
APOE-202ENST00000425718 LIMS2Q7Z4I7 341 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 JAKMIP2Q96AA8 810 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 ERGIC2Q96RQ1 377 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 PI4K2AQ9BTU6 479 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 BCO2Q9BYV7 579 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 RTN4Q9NQC3 1192 aaKnown RBP25.8■■□□□ 1.72
APOE-202ENST00000425718 ATG2AQ2TAZ0 1938 aa25.8■■□□□ 1.72
APOE-202ENST00000425718 A0A1B0GTH6 734 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 WARSP23381 471 aaKnown RBP25.79■■□□□ 1.72
APOE-202ENST00000425718 GCNT1Q02742 428 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 MRPL58Q14197 206 aaKnown RBP25.79■■□□□ 1.72
APOE-202ENST00000425718 PTPN14Q15678 1187 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 TMEM130Q8N3G9 435 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 PDCL2Q8N4E4 241 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 LMO3Q8TAP4 145 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 SNX25Q9H3E2 840 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 RXFP1Q9HBX9 757 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 APEX2Q9UBZ4 518 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 L1RE1Q9UN81 338 aa25.79■■□□□ 1.72
APOE-202ENST00000425718 MTCL1Q9Y4B5 1905 aaKnown RBP25.78■■□□□ 1.72
APOE-202ENST00000425718 CHD7Q9P2D1 2997 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.78■■□□□ 1.72
APOE-202ENST00000425718 EPOPA6NHQ4 379 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 ADH1AP07327 375 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 PON1P27169 355 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 CA8P35219 290 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 GRIN2CQ14957 1233 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 SOWAHAQ2M3V2 549 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 RTP2Q5QGT7 225 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 PLPP4Q5VZY2 271 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 WSCD1Q658N2 575 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 PPFIBP1Q86W92 1011 aa25.78■■□□□ 1.72
APOE-202ENST00000425718 MRPL43Q8N983 215 aaKnown RBP25.78■■□□□ 1.72
APOE-202ENST00000425718 CDCA3Q99618 268 aaPredicted RBP25.78■■□□□ 1.72
APOE-202ENST00000425718 CRACR2AQ9BSW2 395 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms