RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 TATDN1Q6P1N9 297 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 TMEM86AQ8N2M4 240 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 MRPS17Q9Y2R5 130 aaKnown RBP8.84□□□□□ -0.99
CHD7-201ENST00000423902 CIB2O75838 187 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 OLFML2BQ68BL8 750 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 ALKBH5Q6P6C2 394 aaKnown RBP8.84□□□□□ -0.99
CHD7-201ENST00000423902 CELF4Q9BZC1 486 aaKnown RBP8.84□□□□□ -0.99
CHD7-201ENST00000423902 SRRDQ9UH36 339 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 RPL9P32969 192 aaKnown RBP8.84□□□□□ -0.99
CHD7-201ENST00000423902 CRYBB1P53674 252 aaPredicted RBP8.84□□□□□ -0.99
CHD7-201ENST00000423902 ATAT1Q5SQI0 421 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 TRAPPC11Q7Z392 1133 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 C11orf70Q9BRQ4 267 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 PCDHA13Q9Y5I0 950 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 CNTNAP2Q9UHC6 1331 aa8.84□□□□□ -0.99
CHD7-201ENST00000423902 RGS16O15492 202 aaPredicted RBP8.84□□□□□ -1
CHD7-201ENST00000423902 MTSS1O43312 755 aa8.84□□□□□ -1
CHD7-201ENST00000423902 CLTBP09497 229 aa8.84□□□□□ -1
CHD7-201ENST00000423902 SLC1A1P43005 524 aa8.84□□□□□ -1
CHD7-201ENST00000423902 BCAR1P56945 870 aa8.84□□□□□ -1
CHD7-201ENST00000423902 TAF1BQ53T94 588 aaPredicted RBP8.84□□□□□ -1
CHD7-201ENST00000423902 TRIM42Q8IWZ5 723 aa8.84□□□□□ -1
CHD7-201ENST00000423902 BPIFA3Q9BQP9 254 aa8.84□□□□□ -1
CHD7-201ENST00000423902 ATXN3LQ9H3M9 355 aa8.84□□□□□ -1
CHD7-201ENST00000423902 MAP1BP46821 2468 aaKnown RBP8.84□□□□□ -1
CHD7-201ENST00000423902 RFC2P35250 354 aa8.83□□□□□ -1
CHD7-201ENST00000423902 PDIK1LQ8N165 341 aa8.83□□□□□ -1
CHD7-201ENST00000423902 WDCPQ9H6R7 721 aa8.83□□□□□ -1
CHD7-201ENST00000423902 POLD4Q9HCU8 107 aa8.83□□□□□ -1
CHD7-201ENST00000423902 FAM49BQ9NUQ9 324 aa8.83□□□□□ -1
CHD7-201ENST00000423902 CCDC151A5D8V7 595 aa8.83□□□□□ -1
CHD7-201ENST00000423902 EIF4A3P38919 411 aaKnown RBP8.83□□□□□ -1
CHD7-201ENST00000423902 PHEXP78562 749 aa8.83□□□□□ -1
CHD7-201ENST00000423902 TMED2Q15363 201 aa8.83□□□□□ -1
CHD7-201ENST00000423902 SYTL3Q4VX76 610 aa8.83□□□□□ -1
CHD7-201ENST00000423902 NOMO2Q5JPE7 1267 aa8.83□□□□□ -1
CHD7-201ENST00000423902 ANKS3Q6ZW76 656 aa8.83□□□□□ -1
CHD7-201ENST00000423902 VSIG10LQ86VR7 867 aa8.83□□□□□ -1
CHD7-201ENST00000423902 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.83□□□□□ -11e-6■■■■□ 25.7
CHD7-201ENST00000423902 SNTG2Q9NY99 539 aa8.83□□□□□ -1
CHD7-201ENST00000423902 HLA-DRAP01903 254 aa8.83□□□□□ -1
CHD7-201ENST00000423902 TRIM49P0CI25 452 aa8.83□□□□□ -1
CHD7-201ENST00000423902 TRIM49CP0CI26 452 aa8.83□□□□□ -1
CHD7-201ENST00000423902 AKT1P31749 480 aa8.83□□□□□ -1
CHD7-201ENST00000423902 LBX1P52954 281 aa8.83□□□□□ -1
CHD7-201ENST00000423902 NPEPPSP55786 919 aa8.83□□□□□ -1
CHD7-201ENST00000423902 NAA35Q5VZE5 725 aa8.83□□□□□ -1
CHD7-201ENST00000423902 OOSP2Q86WS3 158 aa8.83□□□□□ -1
CHD7-201ENST00000423902 CCDC13Q8IYE1 715 aa8.83□□□□□ -1
CHD7-201ENST00000423902 TTI1O43156 1089 aa8.83□□□□□ -1
CHD7-201ENST00000423902 PHLDB2Q86SQ0 1253 aa8.83□□□□□ -1
CHD7-201ENST00000423902 WDR49Q8IV35 697 aa8.83□□□□□ -1
CHD7-201ENST00000423902 ZNF564Q8TBZ8 553 aaPredicted RBP8.83□□□□□ -1
CHD7-201ENST00000423902 DDI1Q8WTU0 396 aa8.83□□□□□ -1
CHD7-201ENST00000423902 RIPOR3Q96MK2 946 aa8.83□□□□□ -1
CHD7-201ENST00000423902 UBXN6Q9BZV1 441 aa8.83□□□□□ -1
CHD7-201ENST00000423902 FAM114A2Q9NRY5 505 aa8.83□□□□□ -1
CHD7-201ENST00000423902 BCAP29Q9UHQ4 241 aa8.83□□□□□ -1
CHD7-201ENST00000423902 TAC1P20366 129 aa8.83□□□□□ -1
CHD7-201ENST00000423902 LLGL2Q6P1M3 1020 aa8.83□□□□□ -1
CHD7-201ENST00000423902 CASP8AP2Q9UKL3 1982 aa8.83□□□□□ -1
CHD7-201ENST00000423902 PRKCZQ05513 592 aa8.83□□□□□ -1
CHD7-201ENST00000423902 TTC8Q8TAM2 541 aa8.83□□□□□ -1
CHD7-201ENST00000423902 ELOVL4Q9GZR5 314 aa8.83□□□□□ -1
CHD7-201ENST00000423902 PP2D1A8MPX8 630 aa8.83□□□□□ -1
CHD7-201ENST00000423902 ACKR2O00590 384 aa8.83□□□□□ -1
CHD7-201ENST00000423902 ELOA2Q8IYF1 753 aaPredicted RBP8.83□□□□□ -1
CHD7-201ENST00000423902 SLC5A5Q92911 643 aa8.83□□□□□ -1
CHD7-201ENST00000423902 RAB3IPQ96QF0 476 aaPredicted RBP8.83□□□□□ -1
CHD7-201ENST00000423902 F9P00740 461 aa8.83□□□□□ -1
CHD7-201ENST00000423902 CDH6P55285 790 aa8.83□□□□□ -1
CHD7-201ENST00000423902 RHBDL3P58872 404 aa8.83□□□□□ -1
CHD7-201ENST00000423902 DCLK3Q9C098 648 aa8.83□□□□□ -1
CHD7-201ENST00000423902 WNT8AQ9H1J5 351 aa8.83□□□□□ -1
CHD7-201ENST00000423902 SLC13A4Q9UKG4 626 aa8.83□□□□□ -1
CHD7-201ENST00000423902 KCPQ6ZWJ8 1503 aa8.83□□□□□ -1
CHD7-201ENST00000423902 PRRC2BQ5JSZ5 2229 aaKnown RBP8.83□□□□□ -1
CHD7-201ENST00000423902 PFKMP08237 780 aa8.83□□□□□ -1
CHD7-201ENST00000423902 ATXN8OSP0DMR3 200 aa8.83□□□□□ -1
CHD7-201ENST00000423902 MYBP10242 640 aa8.83□□□□□ -1
CHD7-201ENST00000423902 NPTX2P47972 431 aa8.83□□□□□ -1
CHD7-201ENST00000423902 SMARCB1Q12824 385 aa8.83□□□□□ -1
CHD7-201ENST00000423902 RHOT1Q8IXI2 618 aa8.83□□□□□ -1
CHD7-201ENST00000423902 SMARCD1Q96GM5 515 aa8.83□□□□□ -1
CHD7-201ENST00000423902 ASB7Q9H672 318 aa8.83□□□□□ -1
CHD7-201ENST00000423902 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.83□□□□□ -14e-8■■■■□ 21.5
CHD7-201ENST00000423902 MAML3Q96JK9 1138 aa8.82□□□□□ -1
CHD7-201ENST00000423902 RRN3Q9NYV6 651 aa8.82□□□□□ -1
CHD7-201ENST00000423902 PCDHB2Q9Y5E7 798 aa8.82□□□□□ -1
CHD7-201ENST00000423902 RBL2Q08999 1139 aa8.82□□□□□ -1
CHD7-201ENST00000423902 ZNF697Q5TEC3 545 aa8.82□□□□□ -1
CHD7-201ENST00000423902 CINPQ9BW66 212 aaPredicted RBP8.82□□□□□ -1
CHD7-201ENST00000423902 TMTC4Q5T4D3 741 aa8.82□□□□□ -1
CHD7-201ENST00000423902 CENPUQ71F23 418 aa8.82□□□□□ -1
CHD7-201ENST00000423902 AFAP1L1Q8TED9 768 aa8.82□□□□□ -1
CHD7-201ENST00000423902 IL17RBQ9NRM6 502 aa8.82□□□□□ -1
CHD7-201ENST00000423902 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.82□□□□□ -1
CHD7-201ENST00000423902 SMIM35A0A1B0GVV1 85 aa8.82□□□□□ -1
CHD7-201ENST00000423902 RTN2O75298 545 aa8.82□□□□□ -1
CHD7-201ENST00000423902 ASS1P00966 412 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms