RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ANKMY2Q8IV38 441 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 WDTC1Q8N5D0 677 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 KCTD17Q8N5Z5 321 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 C7orf31Q8N865 590 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 MRPL4Q9BYD3 311 aaKnown RBP12.66□□□□□ -0.38
PTPRN-204ENST00000423636 WNT8AQ9H1J5 351 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 PSD3Q9NYI0 1048 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 CWC15Q9P013 229 aaKnown RBP12.66□□□□□ -0.38
PTPRN-204ENST00000423636 COX16Q9P0S2 106 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 FAM169AQ9Y6X4 670 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 NFASCO94856 1347 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 ADORA2AP29274 412 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 EPHX2P34913 555 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 MDH1P40925 334 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 OAZ1P54368 228 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 ZNF200P98182 395 aaPredicted RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 GCNT1Q02742 428 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 ZNF252P-AS1Q0IIN9 211 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 CALCOCO2Q13137 446 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 FBXW10Q5XX13 1052 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 C15orf39Q6ZRI6 1047 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 C12orf65Q9H3J6 166 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 DOCK3Q8IZD9 2030 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 EBAG9O00559 213 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 DKC1O60832 514 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 TOM1L1O75674 476 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 AKAP5P24588 427 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 TARBP2Q15633 366 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 C11orf63Q6NUN7 778 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 SCYL2Q6P3W7 929 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 ERO1BQ86YB8 467 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 ZBTB8OSQ8IWT0 167 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 ANKRD13AQ8IZ07 590 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 DNERQ8NFT8 737 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 NDRG1Q92597 394 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 DDX27Q96GQ7 796 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 CGRRF1Q99675 332 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 TSPYL1Q9H0U9 437 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 CDC42EP4Q9H3Q1 356 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 FAM114A2Q9NRY5 505 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 POC1B-GALNT4F8VUJ3 575 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 RGS16O15492 202 aaPredicted RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 MEFVO15553 781 aaPredicted RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 GH1P01241 217 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 POLR2BP30876 1174 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 GPR162Q16538 588 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 DUOXA2Q1HG44 320 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 DNAJC24Q6P3W2 148 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 DPP9Q86TI2 863 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 HEXIM2Q96MH2 286 aaKnown RBP12.65□□□□□ -0.38
PTPRN-204ENST00000423636 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 CDT1Q9H211 546 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 GOLGA2P5Q9HBQ8 144 aa12.65□□□□□ -0.38
PTPRN-204ENST00000423636 ADCY6O43306 1168 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 ATG7O95352 703 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 PDGFRBP09619 1106 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 CHN1P15882 459 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 YY1P25490 414 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 C15orf59Q2T9L4 293 aaPredicted RBP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 CYP4X1Q8N118 509 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 NAP1L3Q99457 506 aaPredicted RBP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 PRMT1Q99873 361 aaKnown RBP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 CALN1Q9BXU9 219 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 MIS12Q9H081 205 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 RASAL2Q9UJF2 1139 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 AGAP1Q9UPQ3 857 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 MIF4GDA9UHW6 222 aaKnown RBP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 STAG3L1P0CL83 205 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 FDX1P10109 184 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 CHRNA3P32297 505 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 P3H1Q32P28 736 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 NPNTQ6UXI9 565 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 ZC3H18Q86VM9 953 aaKnown RBP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 NLRP14Q86W24 1093 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 ERICH1Q86X53 443 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 RDM1Q8NG50 284 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 CPXM1Q96SM3 734 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 FEZ2Q9UHY8 353 aaPredicted RBP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
PTPRN-204ENST00000423636 SPAG7O75391 227 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 ERLIN2O94905 339 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 HOXC6P09630 235 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 CETPP11597 493 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 RFX1P22670 979 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 CTNNA2P26232 953 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 PTGISQ16647 500 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 LIN9Q5TKA1 542 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 XRRA1Q6P2D8 792 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 ZNF365Q70YC5 407 aa12.64□□□□□ -0.39
PTPRN-204ENST00000423636 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms